| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1548 |
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| Symbol | |
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| ID | 4581295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1521861 |
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| End bp | 1523102 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639768863 |
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| Product | HipA domain-containing protein |
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| Protein accession | YP_915344 |
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| Protein GI | 119384288 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0470095 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCTG AACGCACCGC CGCCAACGTT CAGGCGCTGG ATATCTTCCT GAACCAGCAC
AAGGTCGGCA CCATCGTCCG AACCCCGGGC GATTTCAACG CTTTCAGCTT CGATGCTGCC
TATCGTGCGA CAGGTGGATA CCCCATCCTC AGTCTATCCT TCCGGGCGGC GAATGGCGGG
CTGCGCAAGG ATCCGCGGCC GATCGCAGGT GCCCTGCCGG CCTTCTTCGC CAACCTGCTT
CCCGAGGACA AGCTGCGCGA CGCGATGGAG AAGCATCACG CCGGGCGCGT CCGTCCCGGG
AATGACTTCG ACCTGCTCGC AGCGCTCGGG GCCGATCTGC CCGGCGCGGT GCGCGCCCTT
CCGGGCGACG GCCCTGTCCT GGCCCCGGCG AAGCCCACGC AGACGGCGCC GAAAGCTCGT
TTCTCTCTGG CCGGCGTCCA GATGAAGCTC TCGGTGATGA AGAATACCGG CAAGGGCGGC
GGGCTGACCG TGCCGCTCGG CGACGGCGAC GGACAATATA TCGCCAAGTT CCCCTCCACG
GCGTTTCCGG CGGTGTCGGA GAACGAATTT GCCAACCTCG CACTGGCCGA AGCGATCGGC
ATGGAGGTGC TCGAGCGCGA GCTTGTCACC CGCGACCAGT TCGACGGCAT CCCGGCGGAA
TTCGAGACCA TGACCGAGGG GCGGGTCCTG CTGCTGCGCC GCTTCGATCG CGGGCCGGGC
GGCCAGCGCA TCCATATCGA GGATTTCGCC CAGGTGTTCG GCATTCCTCC CGCGCGCAAA
TACGAAGGTG CAGCCTATCA CGACATCGCA TCAGCGCTCA GCATCGCCAT TTCTCCGTTG
GCGGCGCTGG AGTTCGTCCG GCGTCTTGCG CTCTCGGTGA TCATGGGCAA CGGCGACATG
CACCTGAAAA ACTGGTCGCT GATCTACCCC GGGGACGGCA ACGCCCCTGC CCTCGCGCCC
GTCTACGACC TGCTCTCGAC CATCCCTTAT CTTCCTGCGG ACGACCTAGC CCTATCGCTC
GGCGGCGAGC GCGCCTTCAA AGCACTGACC TCGGCGCGCT GGAAGACTTT CGTTAACCGC
GCCAAGCTCC CCGAACCCGC CGTTTTGAAG GCGGTTGCCG AAACCGTTCA GGCGGTCGAC
GCGCATTGGT GGGATCTGCC CGAACGCGCC GTCGTACCCG GCGCGGTCCT GGAGCGCATC
GACGCCCATG TCCGGACGAT GACGGCCATT CTGGTCGGGT GA
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| Protein sequence | MSAERTAANV QALDIFLNQH KVGTIVRTPG DFNAFSFDAA YRATGGYPIL SLSFRAANGG
LRKDPRPIAG ALPAFFANLL PEDKLRDAME KHHAGRVRPG NDFDLLAALG ADLPGAVRAL
PGDGPVLAPA KPTQTAPKAR FSLAGVQMKL SVMKNTGKGG GLTVPLGDGD GQYIAKFPST
AFPAVSENEF ANLALAEAIG MEVLERELVT RDQFDGIPAE FETMTEGRVL LLRRFDRGPG
GQRIHIEDFA QVFGIPPARK YEGAAYHDIA SALSIAISPL AALEFVRRLA LSVIMGNGDM
HLKNWSLIYP GDGNAPALAP VYDLLSTIPY LPADDLALSL GGERAFKALT SARWKTFVNR
AKLPEPAVLK AVAETVQAVD AHWWDLPERA VVPGAVLERI DAHVRTMTAI LVG
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