Gene Pden_1547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1547 
Symbol 
ID4581294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1521563 
End bp1521871 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content67% 
IMG OID639768862 
ProductXRE family transcriptional regulator 
Protein accessionYP_915343 
Protein GI119384287 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.358445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0388732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTGCCCG AAACAACCTC TCTTCACACG ATCGGCGCAC AGCTTCGCCG GGCGCGGCTG 
GCCGCCGGGT TGACCCAGGA ACAGGTCGCC GAGTTGGCTG GCATTTCCCG CCCGCGCTAC
CGCGACATCG AGACGGGCGC TGCCGCCGCG CGCGCCACTA CTCTGATGAA TGTTGCGCGC
GCGCTCGGGC TCGAGATGAT GTTGATTCCG CAGTTCCTGG TGCCGGCAGT CAACACCTTG
CTCAGCCCCG AGACAGGCGA GGATGCCCCG GCTTTCATCC CCCAGCCGGA GCCTGACGAT
GAGCGCTGA
 
Protein sequence
MVPETTSLHT IGAQLRRARL AAGLTQEQVA ELAGISRPRY RDIETGAAAA RATTLMNVAR 
ALGLEMMLIP QFLVPAVNTL LSPETGEDAP AFIPQPEPDD ER