| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1533 |
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| Symbol | |
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| ID | 4578991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1503942 |
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| End bp | 1508264 |
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| Gene Length | 4323 bp |
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| Protein Length | 1440 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639768848 |
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| Product | methylase/helicase |
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| Protein accession | YP_915329 |
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| Protein GI | 119384273 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0293999 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCT CGTCTCCCGT GACCGATCCG GTCACGCCGC TCGGCGCCGC ACCCGCGATC
CTGGCCGCCG CCAATCTCCT CCTTCCCCAT CTCGAACGCG GTCAACGCGT CGATGCTGCG
ATCCTGCGCA GCGCCATGGA AACCGCTTTC GGTGCGTCCG ACGCCAGTGG TGCCTGGGAC
TGGAAGCTGG CCTACGAGGC CTGCGAAGTC GCCACGGTGC TGTTCCTGCG CAAATACGGA
AAGGCGCTTT TCCGCAAAGC CGCCTCTCCG GTTTCCCGGC TCGCGCTGCT GGAGAAGATC
GCGGGGTTGC TGCCCACGCA GACCCGTCGC TCCGACGAAA GCCAGAGCTT CCAGCAGTTC
AGCACGCCTC TGCCTCTCGG CCTTGCTGCG CTGTCGGCGG CCGGGATCAG GCCTGATGAC
GTGGTGCTGG AACCCTCGGC CGGCACCGGC CTGATGGCGA TCCTGGCGCA GGCTGTCGGC
GGCTCGCTGA TCCTCAACGA GCTTGCCGAG ACCCGCGCCG ATCTTCTCTC TTCCCTCTTT
CCGGCCCTTC CCGTCACCCG GTTCGACGCC GCCCAGATCG ACGATCACCT GGCCACGAAC
GCCGTGCCGT CGGTGGTGCT GATGAACCCG CCTTTCTCGG TCATGGCCAA TGTCGAAGGG
CGGATGGCGG ATGCTTCCCT TCGCCATGTT ACCTCGGCGC TGGCCCGGCT CGTCACCGGC
GGCCGCCTGG TGACGATTAC CGGGGCAAAC TTCGGACCGG AAGCTCCAGC CTGGCGCGAT
GCCTTCATGC GCCTGCAGGA CCGCGGCCGC GTGGTCTTCA CCGCGGCGAT CGATGGCGCG
GTCTTCGCCA GACATGGCAC CCGCATCGAC ACGCGGCTGA CGGTGATCGA CAAGCTGCCC
GCCGACGATC CGTCCCGCTT CCCGGGCTCT CCGGGGATCG CGCCTGATGT TACCACGCTG
ATGGGTTGGA TCGAGGCGCA TGTCCCGAAG CGTTCGCCGG TATCATTGCC GAAGATCGTC
GTGCCCGCTT CGACCATCGC ACCGAAAACC GTGCGAGGCT ATTTGGCCCG CGCGACAGCG
GCGCGGCCTG CCGCTGCTCC TGCCAACGAT CCCGAGGGCG TCGAACTCGC CTATGAGACC
GTGGACTGGA CGCCACCGGA GGGCGCTCGC CTGTCCGATG CCATCTATGA GGAATATGCG
CTGCAATCGC TTCGCATTCC CGGCGCCGCG CCGCACCCGA CCAAGCTGGT GCAGTCCGCC
GCCATGGCCT CCGTCGCACC TCCGAAGCCC TCCTACCGGC CGATGCTGCC CGCCGACATC
CGTACCCGAC TCTCCAACGC CCAACTTGAA ACGGTGATCT ATGCCGGTGA AGCCCATGTC
GATCATCTCG CGGGTGCCTG GATGGTGGAT GAGCATCTCG ACAACGTGAG CGCCGCCGCC
GAGGATGCTG CCAGCGCTGT CCGTTTCCGC CGGGGCTTCA TGCTCGGTGA CGGCACCGGT
GCCGGCAAGG GCCGCCAGTC GGCCGGCATC ATCCTCGACA ACTGGCTGCG CGGGCGGCGC
AAGGCGGTCT GGATCTCCAA ATCCGACAAG CTGATCGAGG ACGCGCAACG CGACTGGTCG
GCGCTCGGCA TGGAGAGGCT GCTGGTCACG CCGCTCTCGC GCTTTCCTCA AGGCGCAAAG
ATCACGCTCA CGGAAGGCAT CCTTTTTACC ACCTATGCCA CGCTACGCTC CGACGACCGG
GGCGAGAAGG TTTCCCGCGT CAAGCAGATC GTCGAATGGT TGGGGTCCGA TTTCGATGGA
GCCATTATAT TCGAGGAAAG CCATTCCATG CAGAATGCCG GTGGCGGAAA AGGCGAACGC
GGTGATGTCG CCGCCTCGCA GCAGGGACGT GCGGGCCTGC GGCTTCAGCA CGCGCTGCCC
GATGCCCGTG TGGTCTATGT CTCTGCGACC GGCGCCACCA CGGTCCACAA TCTCGCCTAT
GCGCAGCGCC TCGGCCTCTG GGGCGGTGAG GATTTTCCGT TCCAGACCCG CGCAGAGTTC
GTCGAGGCGA TTGAGGCCGG CGGTGTGGCG GCCATGGAAG TGCTGGCCCG CGATCTGCGA
TCTCTCGGCC TCTATACCGC CCGCTCACTC TCCTATGATG GCGTCGAGTA TGAACTGATC
GAGCATCAGC TCACGGATGA ACAGCGGCGC ATTTATGATG CCTATGCCGG AGCTTTCGCC
GTCATTCACA ACAATCTCGA TGCGGCAATG CAGGCCGCCA ATATCACCGG CAGTGAAGGC
ACGCTAAACC GGCAGGCCAA ATCCGCCGCG CGCTCGGCCT TCGAGAGCAC CAAGCAGCGT
TTCTTCGGCC ATCTGCTGAC CTCGATGAAA ACCCCGACGC TGATCCGTTC GATCGAAGCC
GATCTGGCGG CGGGCCATGC GGCCGTCATC CAGATCGTCT CGACCGGCGA GGCGCTGATG
GAACGGCGGC TGGCCGAGAT CCCTGCCGAC GAATGGAACG ATATTTCCGT CGATGTCACG
CCGCGGGAGT ATGTCGGCTC GTACTTGCAG CATTCCTTCC CGGTGCAGCT TTATGAGCCC
TTCACCGACA GCGAAGGCAA TTTGTCCTCG CGGCCGGTGT TCCGGGACGG TCAGCCAGTC
GAGAGCCGCG AGGCCGTCGC CCGGCGCGAC GAGATGCTCG AACAGCTCGG CTCGCTGCCG
CCGGTTCCGG GCGCGCTCGA CCAGCTCGTG CAGCGCTTCG GCACCGACCT GGTGGCGGAG
GTCACAGGGC GGTCCCGGCG GATCGTGCGC AAGGGCGATG GTCCATCGGC ACGCCTGGCC
GTCGAGAACC GCGCGCCCTC CGCAAACCTG GCAGAGACCT CGGCCTTCAT GGATGACCAG
AAGCGCGTTC TGGTCTTCTC TGATGCCGGT GGCACGGGGC GCAGCTATCA CGCGGACCTT
TTGGCGCGGA ACCAGCGCCT GCGGGTGCAC TACCTGCTGG AGCCGGGCTG GAAGGCCGAT
GCCGCCATTC AGGGGCTGGG CCGCACGAAC CGGACCAATC AGGCGCAGCC ACCGCTCTTC
CGGCCCATCG CCACGGATGT GAAGGCCGAG AAGCGGTTCC TCAGCACGAT CGCCCGTCGT
CTCGACACGC TGGGTGCGAT CACGCGCGGG CAGCGCCAGA CCGGCGGCCA AGGCCTGTTC
CGGCCCGAGG ATAATCTGGA ATCCGCATAT GCCCGCGATG CGTTGCGCCA GCTCTATCTG
CTTATCGTGC GCGGCAAGGT GGAGGGCTGC TCGCTTGAAC GGTTTGAAAC CGCCACCGGG
CTGAAGCTGA TGGATGCGAA CGGCATCAAG GACGAGTTGC CGCCGATCAC CACCTTCCTG
AACCGTCTGC TGGCGCTGAC CATCGAGTTG CAGGGCATCC TGTTCTCGGC CTTCGAGCAG
CTTCTGCAGG CTCGGATCAA CGGGGCAATT GCATCCGGCA CCTATGACAT GGGGCTGGAA
ACGTTGAAGG CAGAAAGTTT TATCGTCACC GACCGGCAGG TCATCCACAC CCATCCGGGC
ACCGGCGCGG AAACGCGGCT CCTGACTCTG ACCGAACGCA AGCGCAACCA GCCGGTGACG
CTGGATGCGG CACTGGCGGA ACTCGACGAT CCGTGGGCGA AGCTGCTCAT CAACGAGCGG
TCAGGACGGG CGGCGGTGCA GATCCCGACC ACCAGCGTCA TGCTCGACGA TGGCGAGATC
GAACGTCGCG TCCGGTTGAT CCGGCCGATG GAAGCGATGA ACATCCCCGT GCGGGCGATG
GGCGAGACCC ATTGGGTCGA GGCCGAGCGC GCTGCCTTCG CCTCGGCATG GCAGGCCGAG
ATGGACGAAG TGCCGGAGTT CACCGACAGC ATCCTGCATA TGGTGACCGG ACTTCTGCTG
CCGATCTGGA AGCGCCTGCC GCAGGAGTCC TCCCGGGTCT ACCGGTTCCA GACCGACGAG
GGCGAACGCA TCATCGGTCG CCGTGTCTCG CCGGCTTGGG CGGCGAGCGC CTCGGCCAGC
GGCGTCAGCA GCAGCCTGAC ACCAGATGCG GCCTATGCCG CACTGATCGA AGGTCGCACG
ATCCTCGATC TTGCCGAGGG TCTGCAACTG CGACGCGTCC GCGTCATGGG TGCGAACCGG
ATCGAACTGA CCGGCTTTAC CGACACGATG CGCGACCGAC TGCGGACCTA TGGCCTCTTC
AGTGAAATCA CCTCGTGGAA ACTGCGCTTC TTCGTGCCCG TCGATGCAAC GGGACCGGCG
ATTATCGGCA AACTGCTCGA CCGTTTCCCG ATCGAGCGCA TTTCCGAGCG GGAGGCCGCG
TGA
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| Protein sequence | MNISSPVTDP VTPLGAAPAI LAAANLLLPH LERGQRVDAA ILRSAMETAF GASDASGAWD
WKLAYEACEV ATVLFLRKYG KALFRKAASP VSRLALLEKI AGLLPTQTRR SDESQSFQQF
STPLPLGLAA LSAAGIRPDD VVLEPSAGTG LMAILAQAVG GSLILNELAE TRADLLSSLF
PALPVTRFDA AQIDDHLATN AVPSVVLMNP PFSVMANVEG RMADASLRHV TSALARLVTG
GRLVTITGAN FGPEAPAWRD AFMRLQDRGR VVFTAAIDGA VFARHGTRID TRLTVIDKLP
ADDPSRFPGS PGIAPDVTTL MGWIEAHVPK RSPVSLPKIV VPASTIAPKT VRGYLARATA
ARPAAAPAND PEGVELAYET VDWTPPEGAR LSDAIYEEYA LQSLRIPGAA PHPTKLVQSA
AMASVAPPKP SYRPMLPADI RTRLSNAQLE TVIYAGEAHV DHLAGAWMVD EHLDNVSAAA
EDAASAVRFR RGFMLGDGTG AGKGRQSAGI ILDNWLRGRR KAVWISKSDK LIEDAQRDWS
ALGMERLLVT PLSRFPQGAK ITLTEGILFT TYATLRSDDR GEKVSRVKQI VEWLGSDFDG
AIIFEESHSM QNAGGGKGER GDVAASQQGR AGLRLQHALP DARVVYVSAT GATTVHNLAY
AQRLGLWGGE DFPFQTRAEF VEAIEAGGVA AMEVLARDLR SLGLYTARSL SYDGVEYELI
EHQLTDEQRR IYDAYAGAFA VIHNNLDAAM QAANITGSEG TLNRQAKSAA RSAFESTKQR
FFGHLLTSMK TPTLIRSIEA DLAAGHAAVI QIVSTGEALM ERRLAEIPAD EWNDISVDVT
PREYVGSYLQ HSFPVQLYEP FTDSEGNLSS RPVFRDGQPV ESREAVARRD EMLEQLGSLP
PVPGALDQLV QRFGTDLVAE VTGRSRRIVR KGDGPSARLA VENRAPSANL AETSAFMDDQ
KRVLVFSDAG GTGRSYHADL LARNQRLRVH YLLEPGWKAD AAIQGLGRTN RTNQAQPPLF
RPIATDVKAE KRFLSTIARR LDTLGAITRG QRQTGGQGLF RPEDNLESAY ARDALRQLYL
LIVRGKVEGC SLERFETATG LKLMDANGIK DELPPITTFL NRLLALTIEL QGILFSAFEQ
LLQARINGAI ASGTYDMGLE TLKAESFIVT DRQVIHTHPG TGAETRLLTL TERKRNQPVT
LDAALAELDD PWAKLLINER SGRAAVQIPT TSVMLDDGEI ERRVRLIRPM EAMNIPVRAM
GETHWVEAER AAFASAWQAE MDEVPEFTDS ILHMVTGLLL PIWKRLPQES SRVYRFQTDE
GERIIGRRVS PAWAASASAS GVSSSLTPDA AYAALIEGRT ILDLAEGLQL RRVRVMGANR
IELTGFTDTM RDRLRTYGLF SEITSWKLRF FVPVDATGPA IIGKLLDRFP IERISEREAA
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