Gene Pden_1529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1529 
Symbol 
ID4578987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1499748 
End bp1500635 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content62% 
IMG OID639768844 
Producthypothetical protein 
Protein accessionYP_915325 
Protein GI119384269 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0455905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAGAGCG ACCGGTCGGA ACTTCGCTGG GGTGTCGAGA AGCGCCTCGA GTTCATAGAG 
TTCCGCCTGT TCTGGGAGGG ACATGTGAAC CGCAGCGATC TGATGGACCA GTTCGGGGTA
TCGGTGAACC AGGCGTCCAC CGACCTGAAC CGCTACATCG GCTTCGCGCC GGACAACATG
GTCTACGACA AGAGTGCGCG AACCTATGTA CGCGGCTCCG AGTTCAAGCC GCAGTTCCTC
GAGCCCGACG CGAGCCGCTA CCTTGCACAA CTCCGATCAG TCGCTGACGG GCTCCTCGAC
CGCGAGGACG CTTGGATCGC CAACCTCCCG CCCTACGCGG CCGCCCCTAC GCCAGTTCGT
GGGGTCAATC CGGCGACGCT TCGTTCGGTC GTTGGCGCAA TCCGTCGGTC CGAGGCGATC
GAGGTAAAGT ACCAGTCCCT GTCCAGCCCC GAGCCGCGCT GGCGCTGGAT CGCCCCCCAT
GCCATCGCGT TTGACGGTTT CCGCTGGCAC ACTCGGGCGT TCTGCCAAAC CGACGATTGC
TTCAAGGGCT TCCTGTTGTC TCGAATGCTT GAGGTTCGAG GCTCGGGCGA AAGCGACAAA
TCGGCCGGCG ACGATCACGA CTGGCTTGCC GAGGTCACGC TGGAGGTTGG GCCACACCCC
GATCTCTCGG AAACACAAGC GAAGGTTATT GCCCTCGATT ATGGCATGCG CGGCGGCAAG
GCGAAGATCA AGGTGAGACG TGCGCTCCTC TACTATGCGC TCAAACGCCT CGGTCTAGAT
ACCGCCCCCG AAGCGCGCGC GCCCCAGGAC CAGCAGATCG TGCTGATCAA TCGCGACGAG
ATTTTCAGTG GCATTCGAGC AGCTGGCGCT CCGGAGGGTT CGAAATGA
 
Protein sequence
MESDRSELRW GVEKRLEFIE FRLFWEGHVN RSDLMDQFGV SVNQASTDLN RYIGFAPDNM 
VYDKSARTYV RGSEFKPQFL EPDASRYLAQ LRSVADGLLD REDAWIANLP PYAAAPTPVR
GVNPATLRSV VGAIRRSEAI EVKYQSLSSP EPRWRWIAPH AIAFDGFRWH TRAFCQTDDC
FKGFLLSRML EVRGSGESDK SAGDDHDWLA EVTLEVGPHP DLSETQAKVI ALDYGMRGGK
AKIKVRRALL YYALKRLGLD TAPEARAPQD QQIVLINRDE IFSGIRAAGA PEGSK