| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1526 |
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| Symbol | |
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| ID | 4578984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1489811 |
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| End bp | 1492582 |
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| Gene Length | 2772 bp |
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| Protein Length | 923 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639768841 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_915322 |
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| Protein GI | 119384266 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.796043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0729049 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTGA ATTTTACTCC TGGAGATCTT GTCAGAGCGC GCGGCCGTGA ATGGGTTGCC
TTGCCGACAT CCGGCGAGAG CCTGCTCGCC CTGCGCCCCC TCTCGGGCAA TGAAAACGAC
ATCGTGGTTC TTGCCCCGGA TCTCGAGCTT ACACCGGTCG AAGCCGCTCG TTTCGACCTG
CCTGACGATG CGCGCACTAC CGTGCAGTCC AAGGCTGCCC TTCTTGCCGA CGCGTTGCGA
CTGACTCTCC GCCGAGGGGC AGGTCCCTTC CGATCCGCCG CACAGCTCGC GTTCGAACCT
CGGACGTACC AGCTGGTCCC GCTTCTCATG GCCCTTCGGC TTCAGGTCCC GCGGCTGTTG
ATTGCCGACG ACGTTGGCAT CGGCAAGACC ATCGAAGCGG GCCTGATCCT CCGAGAGCTG
ATGGATCGCG GAGAAGTCGA TGCGTTTTCG GTGCTCTGCC CTCCGCACCT CGTGGACCAG
TGGATCACCG AATTGAAGGA TCGCTTCGGG ATCGATGCTG TTGCCGTCAC CTCCGGGACT
GCCGCACGTT TGGAGCGCAA CCTCCCATTG GCGCAAACCC TTTTCGATGC CTATCCCTTC
ACGGTGGTCA GCCTTGACTA TATCAAAGCC GAGAAACGCC GGGATGGGTT CGCCAGGGCC
TGCCCGGATT TCGTTATCGT AGACGAAGCA CACGCCTGCG TCGGGACGCA CAAAGGAAAG
CAGCAGCGTT TTGACCTGCT CCAAGGCCTT GCACGCGACC CTGAGCGTCG GTTGATCCTG
CTGACAGCCA CGCCGCACTC CGGGGACGAG GATGCGTTCG CTCGGCTACT GTCGCTGATC
GACAAGGAAT TCGGGACCGT CAACTTCGAC AACCAGAAAT ACCGCGAGCG CCTTGTCAGG
CACTTTGTTC AGCGGCGGCG CGTCGACCTG GTCGAGGGCG ACTGGGATGA GAACCGCTCG
TTCCCCAAGC ACGAGACGAC CGAATACTCG TATCGCCTGA ACGACGAGCA TCGGGCCTTC
CAAGAGGCCG TGCTTGATTA CTGCTTCTCG GTCGTGTCTC GGGCTGGAGA CGCGCAGAAG
GATCGCCGGC TTGCCTTCTG GGGCACTCTG GCGCTGATGC GCTGTGTCGG ATCGTCACCC
GCAGCCGCCA TGAGCGCGTT GCGAAACCGG GCTTCCAATG AAGACGAGCG CCTCGAGCCG
CAGATCTACG ACGAAGATGG TGATGATGAA GACGCCGTGG ACATCGAGCC AAACACCGTC
TTCTCAAATG ATCCCGCTCT CCAAGGGCTT CTCGACAAGG CCAGCGAACT TCTGACGGCC
GAAGATCCCA AACTGAACGC CCTCATCAAG GCCCTCAAAC CCTTGATCAA AGATGGTGCC
AATCCCGTCG TCTTCTGCCG CTACCTCGCC ACTGCCGAAC ATGTGAAGGA AAGGCTTCGT
AAGGCCTTCA CCAAGCTGAA TGTACAAGCC GTGACAGGTG AACTGACGCC GGACGAACGT
CGCGATCGCG TTGCCGAAAT GGCGGCGGAA GAAGGTTCCA CCAAAGATCA GCGCATCCTT
GTCGCCACGG ACTGCCTGTC GGAAGGGATC AACCTTCAAC AGCTGTTCGA CACCGTGATC
CACTACGACC TTTCCTGGAA CCCGACGCGC CATCAACAGC GCGAAGGTCG CGTGGATCGT
TTCGGACAAC CCGCCGAACT CGTTCGCTCG ATCATGATGT TTTCGCCCGA CAGCGCCATC
GACGGCGCCG TGTTGGACGT CATTCTCCGC AAGGCAGAAG AAATCCGTAA GGCGACGGGC
GTGACTGTGC CTCTGCCCGA GGAGCGGGGA CCGGTCACCG ATGCGCTGAT GGCGGCAATG
ATGCTCCGCC GTGGTGGTGG CAGTCACAAG CAGCTGACGT TGGACCTGCA ACTCGGCGAC
GGTATCCAGG TGATGGAGAC CCGCTGGCGC GACGCAAGCG AGAATGAAAA ACGGTCACGT
GCCCGGTTTG CACAAAATGC CATGAAGCCG ATTGAAGTCG CTCCTGAATG GGACAAGGTG
AAGACCCTCC TTGGATCGCC AGCGGAAGCG CTCGAATTTC TCGAGCGCGC GATGTCTCGG
TTTGGGGTGC CCCTCGAGAA AAAGAAGTCG CTGCAGTTCG CTCACGTGCA TGCCCTTCAG
GATAGCCTCA AGGAAAAGCT GGAGCAGCGT GGGCTGAAGG GCTCTCTGAA ACTGGCCACG
CAGGAACCCG TGCCCTCAGG CGCTTCGCTT CTGACCAGAA CCCATCCGCT GACGTCGTCC
CTGGCAGAAA GCCTGCTTGA AGCCTCTCTC GACACCGAAG CGCTGCCGGA TCTGGGCATC
GGTCGTGTCG GGGCTTGGCC GTGTGCCGCC GTCACTCAGA TGACGCGTGT CGCTCTCTTG
CGTATTCGCT ACAAGCTCAC CGTTCATGCT CGGCGTGAGC GCCTCCTGCT GGCAGAGGAA
GCCGCCCTTG TTGCCCTCGA CAGTAACTCG GTGATTGCCT CTGGCAGCGA GGCGCGCACG
CTGCTTGCCT CTCCCGCGAC TGCTGATTTC GCGTCTGTCG CCCGCGACCG GATGATCAAT
ACGGCGAAGG CGGCCCTTCC TGACCTGCTG GGCGGCCCGA TTGCCGATTT CGTCCAAAAG
CGTGCCGCGG AGCTGGTTGA AGACCACGCC CGCCTTCGTG CTGCCGCCGG TTCCGCGTCG
CGTGTCAGTG TCGAGCCGAT AATTCCCCCA GACGTCATCG GCCTCTTCGT TCTTGTTCCG
GGGGAGGTGT AA
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| Protein sequence | MTVNFTPGDL VRARGREWVA LPTSGESLLA LRPLSGNEND IVVLAPDLEL TPVEAARFDL
PDDARTTVQS KAALLADALR LTLRRGAGPF RSAAQLAFEP RTYQLVPLLM ALRLQVPRLL
IADDVGIGKT IEAGLILREL MDRGEVDAFS VLCPPHLVDQ WITELKDRFG IDAVAVTSGT
AARLERNLPL AQTLFDAYPF TVVSLDYIKA EKRRDGFARA CPDFVIVDEA HACVGTHKGK
QQRFDLLQGL ARDPERRLIL LTATPHSGDE DAFARLLSLI DKEFGTVNFD NQKYRERLVR
HFVQRRRVDL VEGDWDENRS FPKHETTEYS YRLNDEHRAF QEAVLDYCFS VVSRAGDAQK
DRRLAFWGTL ALMRCVGSSP AAAMSALRNR ASNEDERLEP QIYDEDGDDE DAVDIEPNTV
FSNDPALQGL LDKASELLTA EDPKLNALIK ALKPLIKDGA NPVVFCRYLA TAEHVKERLR
KAFTKLNVQA VTGELTPDER RDRVAEMAAE EGSTKDQRIL VATDCLSEGI NLQQLFDTVI
HYDLSWNPTR HQQREGRVDR FGQPAELVRS IMMFSPDSAI DGAVLDVILR KAEEIRKATG
VTVPLPEERG PVTDALMAAM MLRRGGGSHK QLTLDLQLGD GIQVMETRWR DASENEKRSR
ARFAQNAMKP IEVAPEWDKV KTLLGSPAEA LEFLERAMSR FGVPLEKKKS LQFAHVHALQ
DSLKEKLEQR GLKGSLKLAT QEPVPSGASL LTRTHPLTSS LAESLLEASL DTEALPDLGI
GRVGAWPCAA VTQMTRVALL RIRYKLTVHA RRERLLLAEE AALVALDSNS VIASGSEART
LLASPATADF ASVARDRMIN TAKAALPDLL GGPIADFVQK RAAELVEDHA RLRAAAGSAS
RVSVEPIIPP DVIGLFVLVP GEV
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