| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1521 |
|---|
| Symbol | |
|---|
| ID | 4578979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 1481913 |
|---|
| End bp | 1482437 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639768836 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_915317 |
|---|
| Protein GI | 119384261 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1514] 2'-5' RNA ligase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.908349 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0931 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATGATTT ACGTCCTGGC ATATCCACAG TTTGAGCCGA GTGTCGCCGA GCGCATTCGT
CGGTTTCGGA CCGAGAACGA GCCGGCCAGA GCCGAGCTCG TCCCCCCACA CGTAACTCTC
GTGTTCGGGC TGATGAACAT TCGCCCTCAA GAGTTCCAGG AACACTGCGA GGCAGTGGCC
AGCAGGTCAT CGCAGTTTGA GGTGTCTTTC GCCTCAGAGG AGATTACACA CGATCCCTTT
GAAAAGACCC ATAAACTGCT TCTCGTCAGC TCGACCGGAA GTTCCCATTT GGCGGCACTG
CATGACCAGC TCTACGAAGG TGTTCAGAGG GCGGAGCGAA AGGACGATAT TCCCTACCGT
CCACACATGA CGGTCGCGAC GAACCCTGAT CGAACGATTA TCGAGCGTTT AGAGACATCT
TCCCTCGGAG ACTTCCCGCT CTTGGGAACC ATCCGGGCCC TGGAGGTCGT TAAGCTTGAA
CACGGGGGGC TGCACCACCT CCGCACCATC CCATTCGGAA AGTAG
|
|---|
| Protein sequence | MMIYVLAYPQ FEPSVAERIR RFRTENEPAR AELVPPHVTL VFGLMNIRPQ EFQEHCEAVA
SRSSQFEVSF ASEEITHDPF EKTHKLLLVS STGSSHLAAL HDQLYEGVQR AERKDDIPYR
PHMTVATNPD RTIIERLETS SLGDFPLLGT IRALEVVKLE HGGLHHLRTI PFGK
|
|---|
| |