| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1507 |
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| Symbol | |
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| ID | 4581103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1472899 |
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| End bp | 1474653 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639768822 |
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| Product | hypothetical protein |
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| Protein accession | YP_915303 |
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| Protein GI | 119384247 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.369863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGATG ATCGCGAGTT CCGCATCCGC CCGGGGCGTA TCCGCTCCAC CCGGGCGCAG
CAGGCCCGGC CCTTTGTCGC ACAGGCCCTG GCTGCCGCGA AAAAGGCCGG TGGTGGTGTC
TCGCGGGCCG GGCGCGTCAC CCCGGGCAAT CGGTCCCGTT TCGGGCGCGG TCAGCGCGCC
AGCATTCAGG CCAACCGCCT CATCACCGCC CGCACCCGCG GCGCGGTGGT CAAGGCGCGT
GTGGTCCGGC ACAGCGGGAA ATCCGCACCC CTCGGAGCCC ACCTCGATTA CCTGCGCCGG
GATGGCGTGA CCCGGGACGG GGAGAAGGCC AGTCTCTTCG GGCCCGGAAC GGAGGATGCC
GATGGCCGGG CCTTTGCCGG GCGGTGTCGC GATGACCGTC ATCATTTCCG GTTCATCGTC
TCGCCCGACG ACGCGCCGGA CATGTCTGAC CTGCAATCCT TCACCCGCGA TCTCGTCGGG
CGGATGGAAC AGGATCTCGG CACGTCTCTT GACTGGGTCG GCGTCGATCA CTGGAACACC
GCGCATCCGC ACGTCCACTT GATCGTTCGG GGCGTACGCG ACGACGGCCA GGATCTCGTG
ATCTCGCGGG ACTACATCAA GGAGGGCATG CGGGACAGGG CACGGGATAT CATCACCCAG
GAACTGGGCC CACGCAGCGA TCTCGACATC CGCCGGACGC TTGAACGTCA GATCGGGGCC
GAGCGCTGGA CGCAGCTCGA TCGTCAGTTG CTCCGGGATG CCGGGCGTTC CCGCATCCTC
GACATGGCGC CGGATGCGGA TCGGCAGCCG GATGCGTTTC ACGCGCTGAA GGTCGGGCGG
TTGCGCCGGC TGGAAGTGCT CGGCGTCGCC GACCAGATCG GACAGTCGCA ATGGCACATC
AGGGATGATG CAGAGGCAGT CCTGCGGGAG ATGGGGGAGC GTGGCGACAT CATCAAGCGG
ATGCATCGGG CGCTGACGGA ACGCGGGATC GAGCGCGGGT CCTCGAGTTA CGTCCTTGCC
GCAGAGAGCC TCGATGTTCC TGTCATCGGT CGTCTGGTCC AGCGGGGCCT CGATGACGAG
CTGAAGGGGA CAGCCTATGC CGTCGTCGAT GGTGTCGATG GCCGGAGCCA CCATATCCGT
CTGCCCCATC TCGACGCCGC CGGCGACAGC GCGCCGGGCT CGATCGTGGA ACTCCGCACC
TATGACGATT CGCGCGGCCA GCGTCGCGTC GCGCTGGCGG CTCGGTCCGA CCTGGAACTC
GCTGCGCAGG TGACCGCGTC CGGGGCCACC TGGCTCGACC GGCAGGCCAT CGCGCGCGAC
CCGCTCGCCT TGTCGGACCA GGGCTTCGGT GCCGAGGTCC GGCAGGCCCT GGAAGCCCGG
GCCGAGCACC TGGTCACGGA AGGGCTGGCC GAGCGGCGGG GCGGCAGAGT GGTCTTTGCC
CGTCGCCTGC TTGGAACCTT GCGCGAGCGG GAGCTGCAGG CGGTTGGCAC GCAGCTCTCG
GGGGAGACCG GGTTGCTGTT CAACAAGGCG GATGCTGGCG ACTACGTCAG CGGCCTCTAT
CGCCAGCGTC TCGCGCTGGC TTCGGGGCGC TTTGCGATGA TTGAGGGCTA TGGCGCCGAC
GGCGCGCTCG GCTTCCAGCT GGTGCCCTGG TCGCCCTCCC TCGAAAAGCA TCTCGGCCGG
GATGTCACCG GCGTCGCACG CGGGGACGGC GGGGTCGATT GGGACTTCGG CCGCAAGCGC
GGCATCGGCC TCTGA
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| Protein sequence | MPDDREFRIR PGRIRSTRAQ QARPFVAQAL AAAKKAGGGV SRAGRVTPGN RSRFGRGQRA
SIQANRLITA RTRGAVVKAR VVRHSGKSAP LGAHLDYLRR DGVTRDGEKA SLFGPGTEDA
DGRAFAGRCR DDRHHFRFIV SPDDAPDMSD LQSFTRDLVG RMEQDLGTSL DWVGVDHWNT
AHPHVHLIVR GVRDDGQDLV ISRDYIKEGM RDRARDIITQ ELGPRSDLDI RRTLERQIGA
ERWTQLDRQL LRDAGRSRIL DMAPDADRQP DAFHALKVGR LRRLEVLGVA DQIGQSQWHI
RDDAEAVLRE MGERGDIIKR MHRALTERGI ERGSSSYVLA AESLDVPVIG RLVQRGLDDE
LKGTAYAVVD GVDGRSHHIR LPHLDAAGDS APGSIVELRT YDDSRGQRRV ALAARSDLEL
AAQVTASGAT WLDRQAIARD PLALSDQGFG AEVRQALEAR AEHLVTEGLA ERRGGRVVFA
RRLLGTLRER ELQAVGTQLS GETGLLFNKA DAGDYVSGLY RQRLALASGR FAMIEGYGAD
GALGFQLVPW SPSLEKHLGR DVTGVARGDG GVDWDFGRKR GIGL
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