Gene Pden_1496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1496 
Symbol 
ID4580336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1460233 
End bp1461420 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content61% 
IMG OID639768811 
Productmajor facilitator transporter 
Protein accessionYP_915292 
Protein GI119384236 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.372528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCTT TTGCTCTCGT CGGGCTCTAC GCCGCGCAAT CCATCACCGG CAGCATGGTC 
CAAAGTGCCT TGCCCGTGGT TTTACGTGAC GCCGGGGTAG CGCTAGACCG GATTGGTTTG
TTGTCGTTGT TGTTTTTGCC CTGGGTACTC AAGGTGTTCT GGTCCCCACT GGTTGATCGC
TTTTCCACCC CGCGCCGATG GATCTTGATG TGTCAGGGCC TGTTGGCGCT GAGCTATGTA
ATCGGCGCGG CATTCGCGCC TACGACGCAA CTTGCGGCGC TGTTGCCAGT GGTCTTCGTG
ATGGCGCTTT TGGCCGCGAC ACAGGACATC GCGACCGATG CCGCCGGTGT GCATGCCACC
ACCCGCCAAA CGCGATCTCT TGCCAGTGGC GCGAGCACGG TCGGGGGCTA TGCCGGCTTC
CTGATCGGCG GTGGCTTGTG GCTCTGGGTC TACGCTCGGG CAGGATGGGA GCTCTCGATG
GTCTTTCTAG CGGTTGCCAT GCTGTTGCTT ACGCTCCCGG TGCGCGCGTT ACGGATCGAA
CGTCCTGAAG GCACGACGAA GCGGCCATCG TTGCGCCACA GCCTCAAGAA CCGGACTTTG
ATACGCGGGG TCGGTTTTCT TCTGCTGTGG CAAAGTGCGG TGCGGCTCGG TGCGGCGATG
ACCGGCCCCA TGCTTGTGGA TGCCGGTTTT TCGCTGGACG CGATTGGTTG GTTGCGCGGT
GCGGGCGGCA TGATCACCGG CCTGATAGCC GCAGTCGCCG GTATGCTTAT GTGCCGACGT
TTCGGCACCC GTTCCGTGCT GCTGTCGGCG GGGCTCGGTG TGGGGGCTTG TTGCGTAGGG
CTTGCAATCT GGGCGGTTGC GCCCGGTGCT CTCTGGGGGC TGGCAACACT TCAGCTTAGC
CTGTCTGCGC TGACGGCGAT TTCCTTCGTG GCTCTTTATG CCGAGATGAT GAACTGGTGT
GCGCCGGACC AGGTTGCAAC CGATTTTGCA CTGTTGCAGA GCCTCGACGC CGGACTCGCT
GTAATCATTG GGATTCTGGC CGGACAGATT GCGCAGCACT TGGGTTATGC GCCTGTCTTC
GGTGGGGCCG TGGCATTGCT TTTCTGCGCC CTGCCGCTGG TTCGGCGCTG TATGGGCAAG
CCTTTGCCCC CTGAAATTTC TTTGAACAAT GTGGAGATAG CCGAATGA
 
Protein sequence
MPAFALVGLY AAQSITGSMV QSALPVVLRD AGVALDRIGL LSLLFLPWVL KVFWSPLVDR 
FSTPRRWILM CQGLLALSYV IGAAFAPTTQ LAALLPVVFV MALLAATQDI ATDAAGVHAT
TRQTRSLASG ASTVGGYAGF LIGGGLWLWV YARAGWELSM VFLAVAMLLL TLPVRALRIE
RPEGTTKRPS LRHSLKNRTL IRGVGFLLLW QSAVRLGAAM TGPMLVDAGF SLDAIGWLRG
AGGMITGLIA AVAGMLMCRR FGTRSVLLSA GLGVGACCVG LAIWAVAPGA LWGLATLQLS
LSALTAISFV ALYAEMMNWC APDQVATDFA LLQSLDAGLA VIIGILAGQI AQHLGYAPVF
GGAVALLFCA LPLVRRCMGK PLPPEISLNN VEIAE