| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1495 |
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| Symbol | |
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| ID | 4580335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1458248 |
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| End bp | 1460236 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639768810 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_915291 |
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| Protein GI | 119384235 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0440927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGCA GCCTATTCAA TACGGTCTGT GTTGCGGCGC TGACCTTTGG CGCAGCGCCT
CTGACCGCTC AGGAAACCTC GAACGACGAC GTGTTCGAAC TCGGAACGAT CTATATCGTG
GGAGCCAAGC GGCCTCAGGA TGCGCTGAGC TTTCCGGGCA CCGTCGCGCA AGCCGATGCG
TCGGAACTGA GCGGGCGCGG GGTCCAGACG GTGGCGGATC TTGATCGTGT CTTTCCGGGG
CTTGCGGTCG ATACACGGTC ATCCCGGGTC TATTCGAACT TCACCCTCCG TGGCCAGTCC
TCGCTGGATT ATTACAGCAC GTCGGTGCAG GTCTATGTCG ACGGGCTGCC GCAGGATCCG
GCGGTTCTTG CGCAGATGTT CCCCGGCGCT CTGGAAAGCG CTGAAGTCCT CTATGGACCG
CAAGGTAGCC TCTACGGGCG TGGTGCAGTC GGTGGTGTGA TCAATGTGAC CACCCTGAAG
CCGGGTGAGG GTGATCGCTT CTCCTATTCA CTCGGCGGTT CCGAGGAAAG CTATCAGGCG
CAACTGCGCG GGGAACTGCA ATTGGCGGAG GGTCTCTGGG CCGACTTTTC ACTGGCCCGC
AACGACGTGG GGGATGACCT TCAGGTTATG GGCACGGGAG AGGATGTGGG CGGCACCGTC
GAAGATCGCG CGCAGCTGCG ACTGCGTTAT GCGCCCGAGG GTAGTCCGCT CGACATCACA
TTCAGTGCAG CGTGCAACGA AGTGGAGTCC AGCGAGGAAC AGTTCGTCAT GGGCACGGCG
CTGGCGGCCC GACAAGCGGT GCCGTTTCCT TCGAAATATT CGCATGATAC CAATAGCTTC
GGTCTCACGG TTGATTACGA TCTCGGCTGG GCGACATTTT CCTCGCTCAC GGGTTACCAG
GACCGGTTCC TCGATCGGAC GATTTTTGGC TCATACACCC CGGAATGGCA GGAAACCCTG
ACGCAGGAAT TCCGGCTTTC CTCCGCGACA GGTGGACCTG TCGAGTATGT GGCGGGCTTG
TTCTATTCGA ATTCCGAATT CCGCCGTGAA GCCTACGGTT CGACGACGAC GCAGAAGACC
GAAAGCTATG CAGCCTTCGG GGATCTGACC TGGCATGCCA CGGACCGGTT GGATGTTGTT
GCCGGGGCAC GCTGGGATTT TGAGACCACC GATGCAACCG CGACTGGCGT AGTCACCATG
CGGGGCAGCG ATGATTGGAA CGCGTTTTCT CCGAAGCTCG GGCTGAGTTA TTCAATTACA
CCGGAGTGGC AGGCGTACGG GATCGTGAGC AGTGGATTTA AGGCGGGCGG GTTTACGCGC
ACGCTGACCC CTGCGAATAT CGCATATACC TATGACCCCG CGACGACTTG GAACGGCGAG
GCGGGCCTGA AGTACCGGTC GAACAATGGC ACGATCGAAG CCTCCGTCGC AGCCTATTAC
AGCGTGACGG AAGACTACCA GATGTTCGTG GGTACGGCCC CGGCGCAATA CCTTCAAAAC
GTGGGCGAGG TGACAGCCAA GGGTATTGAT GCGACCCTAC GGATCAACCA GGGGCCTTGG
GGGCTGAGCG GTGGCGCTAC GTGGGGAGAG TCGCGTTTTA CCGATTATGA CAGCAGTGCG
ACGCCGGGTC TTTCCTATCA GGGGAATGAT GTTCCCTATG CGCCGGAGTT TACGGCGCGG
CTGGCGGTCG ATTACACGCA TGAACTGGGG GCAGGGCGTG GCCGTCTGAT CCCTCGGTTG
GGGCTCAGCT ATCAGGGAGA TATCTGGTTC GACGAGGCCA ACAGTATCGG TCAGGACGGG
TATTGGCTGG TTGATGCCGG GCTCGCCTGG GAAATGAGCA ACGGTGCTGT TCTGGATCTC
TATGCCACGA ACCTGACGGA CGAGACCTAT GCCTCCTATG GCTTTGACGC CAGCAGCTAC
GGGTTGGGCG ATGTGTATCA GCTCGGACGC GGGCGCGAGA TCGGTATCCG CTTGACCCAG
AGGTTCTGA
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| Protein sequence | MNRSLFNTVC VAALTFGAAP LTAQETSNDD VFELGTIYIV GAKRPQDALS FPGTVAQADA
SELSGRGVQT VADLDRVFPG LAVDTRSSRV YSNFTLRGQS SLDYYSTSVQ VYVDGLPQDP
AVLAQMFPGA LESAEVLYGP QGSLYGRGAV GGVINVTTLK PGEGDRFSYS LGGSEESYQA
QLRGELQLAE GLWADFSLAR NDVGDDLQVM GTGEDVGGTV EDRAQLRLRY APEGSPLDIT
FSAACNEVES SEEQFVMGTA LAARQAVPFP SKYSHDTNSF GLTVDYDLGW ATFSSLTGYQ
DRFLDRTIFG SYTPEWQETL TQEFRLSSAT GGPVEYVAGL FYSNSEFRRE AYGSTTTQKT
ESYAAFGDLT WHATDRLDVV AGARWDFETT DATATGVVTM RGSDDWNAFS PKLGLSYSIT
PEWQAYGIVS SGFKAGGFTR TLTPANIAYT YDPATTWNGE AGLKYRSNNG TIEASVAAYY
SVTEDYQMFV GTAPAQYLQN VGEVTAKGID ATLRINQGPW GLSGGATWGE SRFTDYDSSA
TPGLSYQGND VPYAPEFTAR LAVDYTHELG AGRGRLIPRL GLSYQGDIWF DEANSIGQDG
YWLVDAGLAW EMSNGAVLDL YATNLTDETY ASYGFDASSY GLGDVYQLGR GREIGIRLTQ
RF
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