Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1493 |
Symbol | |
ID | 4580333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 1455181 |
End bp | 1457001 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639768808 |
Product | ABC transporter related |
Protein accession | YP_915289 |
Protein GI | 119384233 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.065388 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTGT CTGAAAACGT CGAGCGGTCG GCTGCAAGCG AAGTGCCAGA GCGGCCTGAC TTCTTTGCCA GCCTGAAACT CCTGATGCGG TACGGGGAGG GTGCAAAGCC GCTTCTCGTG TTGTCGGCGC TCCTGGCGAC CGGCGCCGTG GTGCTGGAGT TGGTGCCGAT CTGGGTCGTC TGGCGATTGG TGATTGCGCT GATTGACGGG ACCGCCTCTG CAGGACTCTT CGCGAGCTAC GCGCTGATCG CCCTGGCGGC GGTGATCGCG GGGTATCTTC TTATGGGACT GGCCTTGGGG CTGAGCCATG TCGCCGCCTT CCGGCTGATA CATGCGTTGC GGCTGGCCAT GGCGCGTCAT CTTGCGCGGC TTCCGATGGG CTGGTTCGCG GGGCGGCGGT CCGGCGGTGC GAAAAAGCTG ATCGTGGATG AGCCGGAGCG GCTGGAGATC CTCGTTGCGC ATGGGCTGCC TGAAGGTGTG TCGGCCATCG GCACTTGGCT GGCTGTGACG ATCTGGCTGT TTGCCGTCGA CTGGCGCATG GCGCTGGCGG CTATCGTCCT CGCACCCGTG GCGTTCGGCC TGATGCTGTC CGCCATGGGA CGCACCTCGC GGATGGTCGG GCAATATCAG GCCGCCGGTG AGCGCATGAA TGGCGCGATT GTGGAGTATT TGGCCGGGAT GGCGGTCATC AAGATCTTCA ACCGCAGCGG CGAAAGCCTT GGTGAGGCCG CTACTGCGGT GCGCGACTAC GCGGCGATAG AGACGGAGAT GGGGCGCCAG TTCGTGCCGC GCGGAGCGCT GTTCTATACG CTGGTGGTGG CCAACATCTG CGTGATCCTG CCTGTTGGCA TGCTGTTGAT GCGCAGCGGC ACGCTGAATC TGACGGGGCT GGCTTTCTTC GTCATCCTTG GAGCGAATTA CAGTCAGCCG CTGCTCAAGC TGTTCAATCT CTTCCACAAT ATGGCGCATA TCTCGATGGC GTCGACGCTG ATTGAAGACG TGTTGGGCAC CCAGACCCAG ACCGATACCG GGAAACGGAT CGAACTGCCG AACCGCGAGG TCAAGTTTGA GAACGTGCGC TTTGGGTATG ACGCCCATGA GGTGATCCAT GACGTCAGTT TCACTGCCGG GGACGGCGCG GTCACGGCAC TGGTCGGTCC CTCCGGGTCG GGCAAGAGCA CGCTGGCCAG TCTGATCCCG CGGCTACACG ACGTATGGGA GGGGCGGATC ACCCTAGGCG GCACGGATAT CCGTGACATC GGGATCGACC AGTTGATGGA GGAAGTGGCC TTCGTGTTCC AGGACACCTT CCTGTTCAGT GGTACGATTG CCGAGAACCT CCGCCTGGGC AAAGCCGGCG CGACCGAAGC AGAGCTTCAT GCCGCTGCCC GCGCCGCACG TGCGCACGCG TTCATTACTG CGCTGCCCGA TGGCTATGAG ACGAAGCTGG GCGAAGGCGG TGCGGCGCTC TCCGGTGGGG AGCGCCAACG CCTCGCCATT GCCAGGGCCA TCCTGAAGAA CGCGCCAGTC ATCGTGCTGG ATGAGGCCAC GGCCTTCGCC GACCCCGACA GCGAGGCAGC CATCCAGGAG GCGCTGAGCG AGCTGGCCAG AGACCGCACG CTGATCGTGG TGGCGCATCG GCTGCACACG ATCATGGGAG CCGACCGGAT CGTTGTGCTG GATCAGGGGC GATTGGCCGA GACCGGGCGG CATGGGGACC TGGTTGCACA GGGCGGGCTC TATGCCCGGC TCTGGGCAGA TTACACGGCG GCTCAGGCAA TCTCGCTGCG CGGCAATCAG GCAGCGGAGG CAGCCCAATG A
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Protein sequence | MAVSENVERS AASEVPERPD FFASLKLLMR YGEGAKPLLV LSALLATGAV VLELVPIWVV WRLVIALIDG TASAGLFASY ALIALAAVIA GYLLMGLALG LSHVAAFRLI HALRLAMARH LARLPMGWFA GRRSGGAKKL IVDEPERLEI LVAHGLPEGV SAIGTWLAVT IWLFAVDWRM ALAAIVLAPV AFGLMLSAMG RTSRMVGQYQ AAGERMNGAI VEYLAGMAVI KIFNRSGESL GEAATAVRDY AAIETEMGRQ FVPRGALFYT LVVANICVIL PVGMLLMRSG TLNLTGLAFF VILGANYSQP LLKLFNLFHN MAHISMASTL IEDVLGTQTQ TDTGKRIELP NREVKFENVR FGYDAHEVIH DVSFTAGDGA VTALVGPSGS GKSTLASLIP RLHDVWEGRI TLGGTDIRDI GIDQLMEEVA FVFQDTFLFS GTIAENLRLG KAGATEAELH AAARAARAHA FITALPDGYE TKLGEGGAAL SGGERQRLAI ARAILKNAPV IVLDEATAFA DPDSEAAIQE ALSELARDRT LIVVAHRLHT IMGADRIVVL DQGRLAETGR HGDLVAQGGL YARLWADYTA AQAISLRGNQ AAEAAQ
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