Gene Pden_1489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1489 
Symbol 
ID4580329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1451349 
End bp1452080 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content64% 
IMG OID639768804 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_915285 
Protein GI119384229 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGCA TCGCCTTCCT GACTGGGTTA GCCAGTCTTG GCTTGATCTG GTCACTGGCG 
GCGCGCAACA GCCTGCCAGC CATTCTGCCG GGCCCTCTGG CCGTGGCTGC AGCACTTTGG
ACGCTCCTCA CGGAGCCCTC ATTTTGGACT GACACGCTGC TGCCCAGCCT TGGTCGGGCA
GCAGCGGGGC TCGCATCAGC GTTCGCCCTC GGAGCTCCAC TTGGATTGGC AGGCTGGCGC
TGGCCCGTAA TCTCGGCCCT GGCGGCACCG TTACGACTGA TCCTGATGGG AATGCCCGCC
CCGATCCTCG CGATCCTGTT CATCCTGTGG TTCGATGGCG GCCCCCTCAC TGTCATCCTC
ACCGTCGCGG TTCTGTTGCT GCCAGTGTTC CAGATCGCCG TCGCCGAGGG CACGGGCAAT
ATCGACTCGC ATCTGGCCGA AATGGCGCGC GTCTTCCGCG TACCGTTGAT GAGACAGTTA
CACCGAATCG CCCTACCTGC CGTATGGACC GCCCTTGGCC CGGCCTTGCG GATCGCTGTG
GCTAATGCCC TGCGCGTTAC CCTGCTGACA GAACTGCTTT CAGGGGCCGA GGGTCTCGGA
GCGGCGGTGC AACGCGCACA GAGCTGGCTT CAAACCGACC GCCTTTTTGC GCTCGTGATC
CTGATCCTTG CGCTGATCGG CCTCGCAGAC ACCGGGCTAG GCCTTTTGCT GCGTGAAAGG
CCACGCCCAT GA
 
Protein sequence
MQRIAFLTGL ASLGLIWSLA ARNSLPAILP GPLAVAAALW TLLTEPSFWT DTLLPSLGRA 
AAGLASAFAL GAPLGLAGWR WPVISALAAP LRLILMGMPA PILAILFILW FDGGPLTVIL
TVAVLLLPVF QIAVAEGTGN IDSHLAEMAR VFRVPLMRQL HRIALPAVWT ALGPALRIAV
ANALRVTLLT ELLSGAEGLG AAVQRAQSWL QTDRLFALVI LILALIGLAD TGLGLLLRER
PRP