| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1486 |
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| Symbol | |
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| ID | 4580326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1447354 |
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| End bp | 1449435 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639768801 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_915282 |
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| Protein GI | 119384226 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.643669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGAA CACCAAAGAC CCGTGCGACG CTGCTCGTCA TGACGACAGC CCTTACGACG
ACCGGCCTCA TACCGGAACG CGCTATCGCG GATGATGACA TCATCTATCT TGGCGAGATC
ACGATCTTCT CCAATTTCTG GGAAGAGCTC GCCCGCAAAG CCGCAGCGAC AGCAACGGTA
CTGGACGAAG AAGACATGTC GCAATCGATC TCCCCAGATC TTGATGCCGT CACGGAAAAA
TCGGCCAATA CAATCTTCCA GCGGGCGAAT TCACAAGAGC GCCTGGTCGT GCGTGGCATG
TCGGCATTCG ACAACGCCTT GTCTGACCCA GTCGGCTATT CGGTAAACGG TGTTCCGCTA
CCAATGGGCA CTATGCAACT GCCGCACTTT TTTGGTGTCG AGAATGTCAC GCTGCTCAAA
GGGCCGCAGG GCACCATATT CGGACGCAAT TCCGAAGCCG GGCTCTTGAC CTTCGAGACG
ATCGCGCCTG GCAGTCGCGA AGGCTGGGAA ATAAACGTCG GGCTTTCCGG ATCGGATGCC
GGGGCCTCGC CTCTCGGAGC CAACGGGTCG ATCCTGTGGT CCGGGCAAGC CACAAACGGT
CCGGCCTTAT CCTTCGGGCT GGAAGTCGCC CGAGATCCCG GCGTGATAAG CAATCCAGTC
ACAGGGGCGG ATGACGGTGG AGAAAACCGA CGCGTGACAG GCTTTCTGGG TCTCGAGTGG
GACTTGCAGG ACGGTGGCTA CCTCAAGCTA ACTACGATGG CCGAAGACCA GGATTTCAAC
AAGGAGCAGT TTCGCTATGT CTCCGGCCCG CTGGCAACCG ACCGCTATGA AAGCGTGTAT
TCAGACCCTT CCTGGGAAAA CCGCCGTATG AGTGTGACTG CACTGGAATA TGGTACCAGT
TTCGACGGAT TCGACCTGAC TGCGATCACC GGGTTCACCA CGTTCGACCG GGAATTCGCA
CTGGATTTCG ACAGTTCTTC ACTGCCTCTC GGCGTTACCG AAATGGATAT CGAGGACCGA
GCCCTCTCAC AGGACATCCG ACTGACCTCA AACAGCGAAG GGCCGCTGAA ATGGACGTTG
GGTGTCAACG CTTTCACGCA GAACACCGAT GCCGATTTCA ATCTCGGCGC CATGTCGACC
GACCGACACA CCGAGATCGA CCAATGGGGA GCCGGGCTCT ATGGTTTCGC TGAATATGCA
TTCACAGACC GGTTCCGCAT AGGGGCGGGC CTGCGGGTCG ATTACGTCTC ATCAAAGGCC
TGGCAGAGGT TCTCTTCGCC GACCGCGAAC CTGCGTTATG AAGGCAGCGA CAGCTCGACC
ACTCTGCTCC CCAAGCTCAC GCTCGCCTAT GACGTGAGCG ATGCGACCAC GATCCACGCA
AGCTATGCAC GTGGCTATAT GCCCGCAGGC TACAACTATG CTTTCGCCAA CAGTGCCGAT
GGCCTGAGCT ATGACGCTGA ATACAGTTGG AATGCGGAAC TCGGGGTAAA GCACGAATTT
GCCAGCGGAG CAGCGCTTAG CCTTGTCGCC TTCCATACCA CGGTCAAAGA TAAGCAGATT
ACCGAGACAA TCCCTGGCGC GGCTCAATAT ATATCGAATG CAGGCGAGGC GAAAAGCTAC
GGGATCGAGA CAGAGTTCAA CGCACCCCTG GCCCGGGGCT GGGAACTCAC CGCCAATGCT
GGCTGGCAGA GGGCACGGGC GACCTCGTTT CAGACCACGA CGACGGACAT ATCTACAGGA
TCGGTGATGG CGGTCGACTG GTCAGGGAAT GCCCTGCCGA TGGCGCCGGA TGTGACCTGG
GGCCTTGCGC TCTCGCATGT CGGAGATATC TGGAGTGGAA AGATCAGCTT GCACGGATCG
GGAAGCTACT GGTTCGACCC GGCAAACAGC CTGAAGCAAG AAGGCTTCAT GACTGTGAAT
GCCGAGATTA CCCGGCAGTT CGGAGGAGGC GAGCTTACTC TCTGGGCCAA GAACCTGTTT
GACGAAGAAT ACTACAGCAC TGCGGCTAAC ACGATCCGGG GCACCGTGGT CGAGGATGGC
AGTCCCCGTA CCGTCGGGCT GAATTGGAGG ATGACTTGGT AA
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| Protein sequence | MSRTPKTRAT LLVMTTALTT TGLIPERAIA DDDIIYLGEI TIFSNFWEEL ARKAAATATV
LDEEDMSQSI SPDLDAVTEK SANTIFQRAN SQERLVVRGM SAFDNALSDP VGYSVNGVPL
PMGTMQLPHF FGVENVTLLK GPQGTIFGRN SEAGLLTFET IAPGSREGWE INVGLSGSDA
GASPLGANGS ILWSGQATNG PALSFGLEVA RDPGVISNPV TGADDGGENR RVTGFLGLEW
DLQDGGYLKL TTMAEDQDFN KEQFRYVSGP LATDRYESVY SDPSWENRRM SVTALEYGTS
FDGFDLTAIT GFTTFDREFA LDFDSSSLPL GVTEMDIEDR ALSQDIRLTS NSEGPLKWTL
GVNAFTQNTD ADFNLGAMST DRHTEIDQWG AGLYGFAEYA FTDRFRIGAG LRVDYVSSKA
WQRFSSPTAN LRYEGSDSST TLLPKLTLAY DVSDATTIHA SYARGYMPAG YNYAFANSAD
GLSYDAEYSW NAELGVKHEF ASGAALSLVA FHTTVKDKQI TETIPGAAQY ISNAGEAKSY
GIETEFNAPL ARGWELTANA GWQRARATSF QTTTTDISTG SVMAVDWSGN ALPMAPDVTW
GLALSHVGDI WSGKISLHGS GSYWFDPANS LKQEGFMTVN AEITRQFGGG ELTLWAKNLF
DEEYYSTAAN TIRGTVVEDG SPRTVGLNWR MTW
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