| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1484 |
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| Symbol | |
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| ID | 4580324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1444974 |
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| End bp | 1445972 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639768799 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_915280 |
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| Protein GI | 119384224 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.307277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAGA CCGATCAGAG ACCAGAGATG AACCAGAGAA GCGCGCGGAT GCTGCGCACC
GCGCTCGGGC CGGCGATCGC CGGGTTTCTG GACGACCCCA TGACCGTCGA GGTGATGCTC
AACCCCGATG GGCGGCTCTG GGTCGACCGA CTTTCCGAGG GGCTGGCCGA CAGCGGCAAG
ACGCTCAGCG CAGCCGACGG CGAGCGCATC GTTCGACTGG TCGCGCACCA TGTCGGCGTC
GAAGTTCATA GCCTGTCCCC TCGCGTTTCC GCGGAGCTCC CGGAAACCGG TGAGCGTTTC
GAGGGGCTGC TTCCGCCCGT GGTCGCCGCT CCGGCTTTCG CCATCCGCAA ACCCGCCGTC
GCCGTCTTCA CCCTCGAAGA TTACGTCACC GCCGGAATCA TGACCCGGAT GCAGGCCGAG
GCGCTGCGCC TGGCGGTTGC GGCGCGTGCC AATATCCTGG TGGCGGGGGG CACCTCGACC
GGCAAGACCA CGCTGACCAA TGCGCTGCTC GCCGAGGTGG CCAAGACCTC CGATCGTGTC
GTGATCATCG AGGACACCCG AGAGCTGCAA TGCGCGGCGC CGAACCTCGT GGCGATGCGC
ACCAAGGACG GCGTTGCGAG CTTGTCCGAT CTGGTGCGCT CCTCGCTGCG TCTGCGCCCC
GATCGTATTC CGATCGGTGA GGTGCGTGGC GCCGAGGCGC TGGACCTTCT CAAGGCTTGG
GGCACCGGAC ATCCGGGCGG CATCGGCACC ATCCATGCCG GTACCGGCAT CGGTGCGCTT
CGTCGTCTCG AGCAGCTCAT CCAGGAAGCC GTCGTTACCG TGCCTCGCGC CATGATCGCG
GAGACCATCG ATCTCGTGGC GGTTCTGGCC GGGCGAGGTT CCGAACGTCG TCTTGCTGAA
CTCGCCTGCG TCGAGGGCCT CGGGGCCGAC GGCGACTACC GGATTTCACC TGCCATTTCA
GGCCCCGCCA TCCCTCACGA ACAAGGAGAT CCCGAATGA
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| Protein sequence | MAKTDQRPEM NQRSARMLRT ALGPAIAGFL DDPMTVEVML NPDGRLWVDR LSEGLADSGK
TLSAADGERI VRLVAHHVGV EVHSLSPRVS AELPETGERF EGLLPPVVAA PAFAIRKPAV
AVFTLEDYVT AGIMTRMQAE ALRLAVAARA NILVAGGTST GKTTLTNALL AEVAKTSDRV
VIIEDTRELQ CAAPNLVAMR TKDGVASLSD LVRSSLRLRP DRIPIGEVRG AEALDLLKAW
GTGHPGGIGT IHAGTGIGAL RRLEQLIQEA VVTVPRAMIA ETIDLVAVLA GRGSERRLAE
LACVEGLGAD GDYRISPAIS GPAIPHEQGD PE
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