| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1476 |
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| Symbol | |
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| ID | 4580297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1437617 |
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| End bp | 1438645 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639768791 |
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| Product | conjugal transfer protein TrbG/VirB9/CagX |
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| Protein accession | YP_915272 |
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| Protein GI | 119384216 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.278158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAC AGCATCTGCA TGCAACCAGG TCTCCGGGCG TCAACAAGCC CACCTTGGTG
GCCTTGCTGC TTTGCGCATC CTTTCTGGCG GGGTGTGCCA CTAACCGGGT GCCGGAATTC
AGCTACGACG AGTCCGTGCC GCCGCTGCCC ACTCCGCCCG CCTCGGCTGC CGCGGAACGT
CCTTGGCCCC TGCATACGCC GCCGGTCTGG ACAGTGGCGC ATGGCGGAGC GGCGGCAGGC
ACACCGACCG GCCGTATTGA AAACGCCAAT GCCGCCGCCC GGATCGAACC GCGCCGCGAG
GGCTATTACA ATGCGATCCA GATCTATCCC TGGTCGGAAG GCGCCCTCTA TCAGGTCTAT
GCCGCGCCGG GTCAGATCAC CAACATCGCA TTGGAGCCGG GCGAGCGCCT GACCGGCGCG
GGCCCGATCG CCGCGGGGGA TACCACGCGC TGGATCATCG GCGACACGGA GAGCGGGTCC
GGATCCACCG CCCGCGTCCA CATCCTCGTC AAACCGACGC GGGACGACAT CTCGACCAAT
CTGGTGATCA GCACTGACAG GCGGGTGTAC ACGATCGAGC TTCGTGCACG CGAGGCGCTC
TACATGCCGT CGGTCGCCTG GGCCTATCCG GCAGCGCCCC GTGGCGGTCG ACAAGCTGTG
GCGACCGCGC CGACCATCCC GGCACCATCG GCCCGCAATC ATCGCTACAG CTTGCAGATC
CAGGGGGAAA GCCCACCCTG GCGTCCTGTC TCGGTCTTCG ACGATGGCCG TCGTGTTTAT
GTCGTCTTCC CGGCTGGCAT CGCCCAGGGC GAGATGCCGC CGCTCTTCGT GCTCGGTGCC
GATGGAGAAC CGCAGATCGT CAACAGCCGT ATCCACCGGA ACGTGCTGAT CGTGGATCGC
CTCTTCGGCG CCGCCGAGCT CCGGCTGGGA GCAGGAGACC GCCAGCAGGT GATCCGGATC
GTGCGCATGG AGGAGCGCGA GGCGGATGCG CGGACGGAGG GCGATGCGCG AAGGGGAGGG
GCGTCATGA
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| Protein sequence | MTEQHLHATR SPGVNKPTLV ALLLCASFLA GCATNRVPEF SYDESVPPLP TPPASAAAER
PWPLHTPPVW TVAHGGAAAG TPTGRIENAN AAARIEPRRE GYYNAIQIYP WSEGALYQVY
AAPGQITNIA LEPGERLTGA GPIAAGDTTR WIIGDTESGS GSTARVHILV KPTRDDISTN
LVISTDRRVY TIELRAREAL YMPSVAWAYP AAPRGGRQAV ATAPTIPAPS ARNHRYSLQI
QGESPPWRPV SVFDDGRRVY VVFPAGIAQG EMPPLFVLGA DGEPQIVNSR IHRNVLIVDR
LFGAAELRLG AGDRQQVIRI VRMEEREADA RTEGDARRGG AS
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