Gene Pden_1470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1470 
Symbol 
ID4580291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1432553 
End bp1433176 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content63% 
IMG OID639768785 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_915266 
Protein GI119384210 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATCG ATATCTGGCT GATCTACGTC GCAACCGTGC TCGCACTGAT GAGTACGCCT 
GGCCCGAGCC AGATGCTGAT GCTGTCGAAC AGCGCCATCA ATGGCTTGCC GCGGGCCTGG
CTCACCGCTG CGGGAGATTT GACAGCGAAC CTGATTCAGA TGCTCGCCGC CGGCCTGGGG
CTGGCGACTG TCATCGCCAC CTCCGCCGAG GCCCTGACCG TCGTAAAATG GGCCGGCGCC
CTCTATCTCC TGTGGATCGG CCTGCGTACG CTTCGGCGAT CCATGAAGCC CATATCGCAC
TCCGCTTCTC GACGGGCCTC CCTGCGGACC CTTTGGCTGC AAGGCTTCGT GACTTCGGCG
GCCAACCCCA AGGCCGTGGT CTTCTTCGCA GCGCTGTTTC CCCAGTTCAT TGATCCGGAG
TTGCCGTTCT GGCCGCAGTT TCTGGTTCTG TCGGCCACCT ATATCGCAAT CGACGGAGCG
TTCCTGACCG GATACGGGGC TGGCGCGCAT TGGCTCTCCC AACGGCTGAA GGGTGAGGCC
CGTCGTTGGC TGGACCGGAT CGGAGGCAGC TGCATGATCC TGGCAGCGGT ACTCCTGGGG
ATGAAGAACG CCGCCAGCCG CTAA
 
Protein sequence
MPIDIWLIYV ATVLALMSTP GPSQMLMLSN SAINGLPRAW LTAAGDLTAN LIQMLAAGLG 
LATVIATSAE ALTVVKWAGA LYLLWIGLRT LRRSMKPISH SASRRASLRT LWLQGFVTSA
ANPKAVVFFA ALFPQFIDPE LPFWPQFLVL SATYIAIDGA FLTGYGAGAH WLSQRLKGEA
RRWLDRIGGS CMILAAVLLG MKNAASR