| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1448 |
|---|
| Symbol | |
|---|
| ID | 4580232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 1416302 |
|---|
| End bp | 1417177 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639768764 |
|---|
| Product | PhzF family phenazine biosynthesis protein |
|---|
| Protein accession | YP_915245 |
|---|
| Protein GI | 119384189 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0384] Predicted epimerase, PhzC/PhzF homolog |
|---|
| TIGRFAM ID | [TIGR00654] phenazine biosynthesis protein PhzF family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.959683 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAC GCATGCTGCA GATCGATGCC TTTTCGGACC GACCCTTGCT GGGCAATCCG
GCGGCGGTGG TCTTCGACGC CGATGACTTG TCCACCGAGA TCATGCAACG CATCGCGCGC
GAGATGAACC TCTCCGAGAC CGTGTTCCTG CTTCGCCCGA CCGGTGACGC GGACTATCGC
GCCCGCATTT TTACCCCGGT GCGCGAACTG CCCTTCGCCG GTCATCCGAC CATCGCCGCC
GCCCATGCGT TTTGCGGCGA GCAAAGCAGA ACGCCCCAAA GCCTGACGCA GGAATGCGGC
ATCGGACTGG TTCCGATCCG CGTCGAAGAC GACCTTTACA CGATGACGCA GGCGACGCCC
CAATTCCGCG ATGTGCCGGT CACCAAAGCT GAACTTGCCG AGGCGATCAG CCTTCAACTC
GATTTGCTCA CGAACAGCCC GCATCAGATC GTCTCGACGG GGGTTCCATG GCTGTTGCTT
GAGCTGCACG ACCTTCAGGC ACTGGCCAGC CTGCGACCCG ACCTCGGTCG GATCGAGCGG
ATCTGCCATG GGCTCGGCGC GGCAGGGCTC ACGGTCTTTG CCGACAGCGG GTCCGGGGCC
ACGCCGCGCT TGCGTGTACG CACCTTTGCT CCGGGTGAGG GCGTGGCCGA GGATCCTGTT
TGTGGGACTG GCAATGGCGC CATTGCTGCG TGGATCGCCA CGCATCGCGA CGCGGTGCCT
CGGGGTGGTT ACCTGTCGGA GCAAGGGGTC GAGATGGGCC GGCGCGGGCT GGTTAACGCG
GGCTGGGAAA CGACAGCCGA AGGGCTGCGC ATCACCATCG GCGGGGCCGC CTGTATCGTC
CTGCGTGGCG AGTTGGACCT GGGTGACGCG TCCTGA
|
|---|
| Protein sequence | MKKRMLQIDA FSDRPLLGNP AAVVFDADDL STEIMQRIAR EMNLSETVFL LRPTGDADYR
ARIFTPVREL PFAGHPTIAA AHAFCGEQSR TPQSLTQECG IGLVPIRVED DLYTMTQATP
QFRDVPVTKA ELAEAISLQL DLLTNSPHQI VSTGVPWLLL ELHDLQALAS LRPDLGRIER
ICHGLGAAGL TVFADSGSGA TPRLRVRTFA PGEGVAEDPV CGTGNGAIAA WIATHRDAVP
RGGYLSEQGV EMGRRGLVNA GWETTAEGLR ITIGGAACIV LRGELDLGDA S
|
|---|
| |