Gene Pden_1429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1429 
Symbol 
ID4580484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1400353 
End bp1400946 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content59% 
IMG OID639768745 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_915226 
Protein GI119384170 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATTG CGACGATCGG GGCGCTGGCG CTCTATGCCT TTGTCATGTC GATCACCCCG 
GGACCAAACA ACATGCTTCT CGCAAACGCG GGACTGGTAT TTGGCTTCCG GAGCACCATA
CCGCAGATCG TTGGCATTCC GACCGGTGTG ATCTCCCAGA TCCTGCTCGT GGCCGCCGGT
CTCAGCAGCC TTTTCGCACA GTTTCCCAGT ATCCAGTTGG CACTCAAGGT GGCTGGGACG
TTCTATCTGC TCTGGCTCGC CCTGAAGCTT TGGAAAGCCG ATGCGCTGGC GCAATCACCT
AATGCCACCC CGATCTCGTT TTCTCAGGCG CTGCTGTTCC AGTTCATCAA TCCGAAATCT
TGGCTGATCG CGCTCACCGC CGTGTCGGCA TTTCTGCAGC CCGAGCAGGC GGTTGTTCCT
CAATTGCTGA TCATTTGCTT GGCTTTCGCA TTGATCGGCA CCCCGTGCAT GGCCGTCTGG
TCTGCCATGG GATCCGCTCT GCGGCGCCAC CTTTCGAGTC CGACCAGCCT CAGGCGCGCA
AACCGAACCC TAGCGGCGCT CGCATCGGCA ACGTGCCTCA TGTTCTGGCT CTGA
 
Protein sequence
MQIATIGALA LYAFVMSITP GPNNMLLANA GLVFGFRSTI PQIVGIPTGV ISQILLVAAG 
LSSLFAQFPS IQLALKVAGT FYLLWLALKL WKADALAQSP NATPISFSQA LLFQFINPKS
WLIALTAVSA FLQPEQAVVP QLLIICLAFA LIGTPCMAVW SAMGSALRRH LSSPTSLRRA
NRTLAALASA TCLMFWL