| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1425 |
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| Symbol | |
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| ID | 4580480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1392368 |
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| End bp | 1395784 |
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| Gene Length | 3417 bp |
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| Protein Length | 1138 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639768741 |
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| Product | ABC transporter related |
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| Protein accession | YP_915222 |
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| Protein GI | 119384166 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.886834 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTTG GACTGCTTGC TGGCTATCGT TCCGTTCTGG TGCTTTCCGC CATTTTGTCG
ATCTTCGGAA CGGGCCTCGG GTTGGTACCG TATCTCGCCG CCTGGAGGAT TGCAGTGGCG
ATTCAAGGGG CAGGGATCGA CGCCGGAGAA CTTGTGTACT GGACGGTGCT CGCGGTGTGT
GCGCTGATCA CCAAGGCATT GCTGCAGGCT GGGGCGACGA CGTTGTCGCA TGTGGCAGCC
TATCGCATCC TTTATCAACT GCGGCATCGT CTAGTCGAGA AACTGGCACG AGTGCCGCTT
GGCGTTTTGT CAGGAACTAC CTCCGGCCAT CTTCGAAAGA TCGTCATGGA GGATGTCGAG
CAGATTGAAG AAGGCATTGC TCACGCGATC CCGGACTTGG CCGCAGGACT TTCGGTTCCG
ATCCTATCTG GGGTTCTTCT CCTTTGGGTG GACTGGCGCA TGGGTATCGC AGCAGTGGCC
ATGTTTCCAT TGCTGCTTGG GGTCTATCTT CTCACCTTGC GTGCGACGCG GCCGCATTTG
GCTGCCTATG TCGGGGCGAT CTCAAACTTG CGTTCTATTT CGGTCCAGTA TGTTCGCGGA
ATCAGGGAGA TCCGGACGTT TCTGCACACT GGCACAATTC TCGAGGAGCT CCACGACGCA
CTGGATCGGA TGGCGCGCGT CGGTCAGTCC TTTGCCTTGT CGAGCCTCAC GCCAATGGCG
ATCCTCTATG CCGGCCTTCG GGCTAATGTT CTTGTGTTGA TCCCCGTCGG AGCCTTTCTG
TACCTGTCGG ATGAAATCTC CGTCACTGAC CTCACACTCT TTCTGTTATT GGGGTTGGGG
ATCAACGCGC CACTGCTGAA GGTCGTCTTT TCGGCAGGTA ACTTCTTTTG GAAGCTGAAA
GGGGCAAGCG CGCAGATCTC CACAATCTTT GAAACCGAGG AGCTTCCTCA GCCCGAGTAT
CCACAGAGAC CCGACGGCTA CGACATTAGC TTTCAGGATG TGTCGCTATC TATGGACGGG
AACGCCATTT TGTCGCGGGT ATCGGTCACG ATTCCGGCAG GCACGACCCT TGCTCTCGTC
GGGCCGTCCG GTGCGGGCAA GTCGACTTTG GCGCGTTTGT TGATGCGATC TCGTGATCCT
GATCTGGGGC GCATCCTGAT CGGAGGCTGC GATCTCCGCC AGATGGAAGA TCGACATCTC
GAAGGTATGG TCAGCGCGGT GCTGCAAGAC GCCTGGCTCA TGAATGCGAC AATCTATGAA
AATATCCTTT CCGGGCGCCC CACCGCGTCT CGCAAAGAAG TCGAGGCCGC CGCCCGTGCC
GCAAGGGTGA CGGAGTTCTC AGCTGATTTG TCCTTTTTTG TTGGCGAGGG GGGACGCAGC
CTCTCAGGCG GGCAGCGACA ACGTGTGGCT ATCGCCCGTG CCATTCTGCG CTCTACACCG
ATCGTCGTGT TGGATGAAGC GACAGCGGCT TTGGATCCCG ACAATGAACA GGCGGTGCGG
GAAGCTCTGG CCGAACTGGC GCATGGAAGA ACGGTTCTCG TGATCGCGCA TCGCCTAGAC
ACCATACGCA ATGCCGACCA GATAGCTTTT GTAGAGGCAG GTGAGATCTC CGACCTTGGA
AGCCATAGCG ACCTTCTGCA GCGGTCCTCC GGTTACCGAC GGTTGTGGAA GGAATATGAT
TCAGTCGAAG GCTGGCATCT TGAACCGGGC GCTGTTCGAT CATTGCCTAC TGTCGTGCAG
AGGCCTGGCC AAGCCTATCA GGAGCCTGGG ATCCCTTCGG GAATGGTCGC ACGTTTCATG
CACCTCGCGG GCCCGGGACG TCGTACACTG ATGTCCAAGG CTCTGCCCAT GCTCGCGCTT
GAAGGGGCCG TGGCCGGAGC GCCAGTGATC GCAGTGTGGT TGGTGCTCGA TCGCGTTTTG
GCCGGTGATC TTACCCGGCC TTTCGCGGTC GCGGCTTCGG GTTTCGTCGC GCTGTGCATA
CTCATGTTCG TTTTTGCCAA TAGGCTTTCG CACCGGGTGT TGTGGCAGGT CCAAAGCACC
GCTGTATCGG CCCTGCAGGC ACGCATTGCC CGACAGATGC GTCAGATACC ACTGGGTGAC
GTGATTGCTC GCGATACCGG TTCGCTGGAA GCGCTTATGT CGCAGCATTC TGCAGCGATC
AACTTTGTCA CGCCTCCTGC TCTGGCGATG CGGGCCATGG TCGGTCCGCT TCTCAGCGCG
ATTGTTCTTT TCTTTCTGGA TTGGCGATTG GCCCTCTTGA CCTGTGCGAT GGTGCCCGCG
TTCGGTGTGG TAATGGTGTT CGCTGACAGG GTGAACGCTC GGATGCTGCA GCGACTGGTT
GTTTCGAATG AGATGCTCTC TGCTCGCCTG TTGGACTATA TTCAGGGCTT GCCAACCTTG
CGCAGCCTCG GCCTCTCCCA AGCATATGGC CCTGTGGAGG ACGCCCTGGA GACGCACAGA
CGCATCTCAC TGTCCACGGT AACGGCGCTG ATGCCGATCG TTACGGCAGG GTGGATATTC
CTGGACGCGG GCTTCGTGAT CTTGCTCGCC GGCGGTGGCT GGATGGTCCT GCATGAACTC
ATGGAAGCAT CGACGTTCCT GCTCTTTCTC GTGGTAAGTT TGGTGTTCTA TGCGCCACTG
ACTGATGCGT TCGACTTGTC GTCGCAATTG CGCCTCCTGC AAAAGTCCAT GTCGCGAGTG
GGGGAATTTC TTGCGATCGC CCCTCTTCCC GAACCCGAAA CGCCAAAGTT ACCCGTTTCT
CTGGATCTTC GTTTTCAAGA CGTTCATTTT TCTTACGGCG ATAAGCCGGT CTTGAGTGGC
ATCAATCTTG ATTTCCCGGC GGGGAAAATT CACGCGCTTT GCGGTCCGTC GGGATCCGGA
AAATCGACTA TTCTCGACCT GATTGCGCGT TTCTGGGACG TCCAGAAGGG GCATGTCACG
ATTGGAGGCG TGGACATTCG AGACATTGCG CCAGAATTGC GCAGCGCCAT GGTCGCAGTG
GTTTTCCAGG ACAGCTACCT CTTCGATATG AGCGTCGCGC GAAATCTGCG GTTAGCCAGG
GCCGGCGCAA GCGATGAAGA ATTGTACGCT GCTGCTCAGG CGGCCTGTTG TCATGACTTC
ATCATGGCGT TGCCGAAGGG ATATGAGACC GTCATAGGCG AAGGTGGAGC AAAGCTCTCC
GGCGGTGAAC GTCAGCGCAT TGCTCTTGCG CGGGCCTTCC TGAAGGATGC TCCGATCATT
TTGCTGGATG AGGCGGCGGC GTCCGTCGAT CCCGAGACAG AGAGCCATAT GCGTCAAGGG
CTAGCCAAAC TATGCGCCGG TCGAACCGTG ATTATGATCG CACATCGGCC AAGTACGATG
CGTCAAGTCG ATCAGAGGAT AGAGATGAAG GACGTGCTTG GTCGCGACGA CCGCTGA
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| Protein sequence | MIVGLLAGYR SVLVLSAILS IFGTGLGLVP YLAAWRIAVA IQGAGIDAGE LVYWTVLAVC
ALITKALLQA GATTLSHVAA YRILYQLRHR LVEKLARVPL GVLSGTTSGH LRKIVMEDVE
QIEEGIAHAI PDLAAGLSVP ILSGVLLLWV DWRMGIAAVA MFPLLLGVYL LTLRATRPHL
AAYVGAISNL RSISVQYVRG IREIRTFLHT GTILEELHDA LDRMARVGQS FALSSLTPMA
ILYAGLRANV LVLIPVGAFL YLSDEISVTD LTLFLLLGLG INAPLLKVVF SAGNFFWKLK
GASAQISTIF ETEELPQPEY PQRPDGYDIS FQDVSLSMDG NAILSRVSVT IPAGTTLALV
GPSGAGKSTL ARLLMRSRDP DLGRILIGGC DLRQMEDRHL EGMVSAVLQD AWLMNATIYE
NILSGRPTAS RKEVEAAARA ARVTEFSADL SFFVGEGGRS LSGGQRQRVA IARAILRSTP
IVVLDEATAA LDPDNEQAVR EALAELAHGR TVLVIAHRLD TIRNADQIAF VEAGEISDLG
SHSDLLQRSS GYRRLWKEYD SVEGWHLEPG AVRSLPTVVQ RPGQAYQEPG IPSGMVARFM
HLAGPGRRTL MSKALPMLAL EGAVAGAPVI AVWLVLDRVL AGDLTRPFAV AASGFVALCI
LMFVFANRLS HRVLWQVQST AVSALQARIA RQMRQIPLGD VIARDTGSLE ALMSQHSAAI
NFVTPPALAM RAMVGPLLSA IVLFFLDWRL ALLTCAMVPA FGVVMVFADR VNARMLQRLV
VSNEMLSARL LDYIQGLPTL RSLGLSQAYG PVEDALETHR RISLSTVTAL MPIVTAGWIF
LDAGFVILLA GGGWMVLHEL MEASTFLLFL VVSLVFYAPL TDAFDLSSQL RLLQKSMSRV
GEFLAIAPLP EPETPKLPVS LDLRFQDVHF SYGDKPVLSG INLDFPAGKI HALCGPSGSG
KSTILDLIAR FWDVQKGHVT IGGVDIRDIA PELRSAMVAV VFQDSYLFDM SVARNLRLAR
AGASDEELYA AAQAACCHDF IMALPKGYET VIGEGGAKLS GGERQRIALA RAFLKDAPII
LLDEAAASVD PETESHMRQG LAKLCAGRTV IMIAHRPSTM RQVDQRIEMK DVLGRDDR
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