Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1425 |
Symbol | |
ID | 4580480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 1392368 |
End bp | 1395784 |
Gene Length | 3417 bp |
Protein Length | 1138 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639768741 |
Product | ABC transporter related |
Protein accession | YP_915222 |
Protein GI | 119384166 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.886834 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGTTG GACTGCTTGC TGGCTATCGT TCCGTTCTGG TGCTTTCCGC CATTTTGTCG ATCTTCGGAA CGGGCCTCGG GTTGGTACCG TATCTCGCCG CCTGGAGGAT TGCAGTGGCG ATTCAAGGGG CAGGGATCGA CGCCGGAGAA CTTGTGTACT GGACGGTGCT CGCGGTGTGT GCGCTGATCA CCAAGGCATT GCTGCAGGCT GGGGCGACGA CGTTGTCGCA TGTGGCAGCC TATCGCATCC TTTATCAACT GCGGCATCGT CTAGTCGAGA AACTGGCACG AGTGCCGCTT GGCGTTTTGT CAGGAACTAC CTCCGGCCAT CTTCGAAAGA TCGTCATGGA GGATGTCGAG CAGATTGAAG AAGGCATTGC TCACGCGATC CCGGACTTGG CCGCAGGACT TTCGGTTCCG ATCCTATCTG GGGTTCTTCT CCTTTGGGTG GACTGGCGCA TGGGTATCGC AGCAGTGGCC ATGTTTCCAT TGCTGCTTGG GGTCTATCTT CTCACCTTGC GTGCGACGCG GCCGCATTTG GCTGCCTATG TCGGGGCGAT CTCAAACTTG CGTTCTATTT CGGTCCAGTA TGTTCGCGGA ATCAGGGAGA TCCGGACGTT TCTGCACACT GGCACAATTC TCGAGGAGCT CCACGACGCA CTGGATCGGA TGGCGCGCGT CGGTCAGTCC TTTGCCTTGT CGAGCCTCAC GCCAATGGCG ATCCTCTATG CCGGCCTTCG GGCTAATGTT CTTGTGTTGA TCCCCGTCGG AGCCTTTCTG TACCTGTCGG ATGAAATCTC CGTCACTGAC CTCACACTCT TTCTGTTATT GGGGTTGGGG ATCAACGCGC CACTGCTGAA GGTCGTCTTT TCGGCAGGTA ACTTCTTTTG GAAGCTGAAA GGGGCAAGCG CGCAGATCTC CACAATCTTT GAAACCGAGG AGCTTCCTCA GCCCGAGTAT CCACAGAGAC CCGACGGCTA CGACATTAGC TTTCAGGATG TGTCGCTATC TATGGACGGG AACGCCATTT TGTCGCGGGT ATCGGTCACG ATTCCGGCAG GCACGACCCT TGCTCTCGTC GGGCCGTCCG GTGCGGGCAA GTCGACTTTG GCGCGTTTGT TGATGCGATC TCGTGATCCT GATCTGGGGC GCATCCTGAT CGGAGGCTGC GATCTCCGCC AGATGGAAGA TCGACATCTC GAAGGTATGG TCAGCGCGGT GCTGCAAGAC GCCTGGCTCA TGAATGCGAC AATCTATGAA AATATCCTTT CCGGGCGCCC CACCGCGTCT CGCAAAGAAG TCGAGGCCGC CGCCCGTGCC GCAAGGGTGA CGGAGTTCTC AGCTGATTTG TCCTTTTTTG TTGGCGAGGG GGGACGCAGC CTCTCAGGCG GGCAGCGACA ACGTGTGGCT ATCGCCCGTG CCATTCTGCG CTCTACACCG ATCGTCGTGT TGGATGAAGC GACAGCGGCT TTGGATCCCG ACAATGAACA GGCGGTGCGG GAAGCTCTGG CCGAACTGGC GCATGGAAGA ACGGTTCTCG TGATCGCGCA TCGCCTAGAC ACCATACGCA ATGCCGACCA GATAGCTTTT GTAGAGGCAG GTGAGATCTC CGACCTTGGA AGCCATAGCG ACCTTCTGCA GCGGTCCTCC GGTTACCGAC GGTTGTGGAA GGAATATGAT TCAGTCGAAG GCTGGCATCT TGAACCGGGC GCTGTTCGAT CATTGCCTAC TGTCGTGCAG AGGCCTGGCC AAGCCTATCA GGAGCCTGGG ATCCCTTCGG GAATGGTCGC ACGTTTCATG CACCTCGCGG GCCCGGGACG TCGTACACTG ATGTCCAAGG CTCTGCCCAT GCTCGCGCTT GAAGGGGCCG TGGCCGGAGC GCCAGTGATC GCAGTGTGGT TGGTGCTCGA TCGCGTTTTG GCCGGTGATC TTACCCGGCC TTTCGCGGTC GCGGCTTCGG GTTTCGTCGC GCTGTGCATA CTCATGTTCG TTTTTGCCAA TAGGCTTTCG CACCGGGTGT TGTGGCAGGT CCAAAGCACC GCTGTATCGG CCCTGCAGGC ACGCATTGCC CGACAGATGC GTCAGATACC ACTGGGTGAC GTGATTGCTC GCGATACCGG TTCGCTGGAA GCGCTTATGT CGCAGCATTC TGCAGCGATC AACTTTGTCA CGCCTCCTGC TCTGGCGATG CGGGCCATGG TCGGTCCGCT TCTCAGCGCG ATTGTTCTTT TCTTTCTGGA TTGGCGATTG GCCCTCTTGA CCTGTGCGAT GGTGCCCGCG TTCGGTGTGG TAATGGTGTT CGCTGACAGG GTGAACGCTC GGATGCTGCA GCGACTGGTT GTTTCGAATG AGATGCTCTC TGCTCGCCTG TTGGACTATA TTCAGGGCTT GCCAACCTTG CGCAGCCTCG GCCTCTCCCA AGCATATGGC CCTGTGGAGG ACGCCCTGGA GACGCACAGA CGCATCTCAC TGTCCACGGT AACGGCGCTG ATGCCGATCG TTACGGCAGG GTGGATATTC CTGGACGCGG GCTTCGTGAT CTTGCTCGCC GGCGGTGGCT GGATGGTCCT GCATGAACTC ATGGAAGCAT CGACGTTCCT GCTCTTTCTC GTGGTAAGTT TGGTGTTCTA TGCGCCACTG ACTGATGCGT TCGACTTGTC GTCGCAATTG CGCCTCCTGC AAAAGTCCAT GTCGCGAGTG GGGGAATTTC TTGCGATCGC CCCTCTTCCC GAACCCGAAA CGCCAAAGTT ACCCGTTTCT CTGGATCTTC GTTTTCAAGA CGTTCATTTT TCTTACGGCG ATAAGCCGGT CTTGAGTGGC ATCAATCTTG ATTTCCCGGC GGGGAAAATT CACGCGCTTT GCGGTCCGTC GGGATCCGGA AAATCGACTA TTCTCGACCT GATTGCGCGT TTCTGGGACG TCCAGAAGGG GCATGTCACG ATTGGAGGCG TGGACATTCG AGACATTGCG CCAGAATTGC GCAGCGCCAT GGTCGCAGTG GTTTTCCAGG ACAGCTACCT CTTCGATATG AGCGTCGCGC GAAATCTGCG GTTAGCCAGG GCCGGCGCAA GCGATGAAGA ATTGTACGCT GCTGCTCAGG CGGCCTGTTG TCATGACTTC ATCATGGCGT TGCCGAAGGG ATATGAGACC GTCATAGGCG AAGGTGGAGC AAAGCTCTCC GGCGGTGAAC GTCAGCGCAT TGCTCTTGCG CGGGCCTTCC TGAAGGATGC TCCGATCATT TTGCTGGATG AGGCGGCGGC GTCCGTCGAT CCCGAGACAG AGAGCCATAT GCGTCAAGGG CTAGCCAAAC TATGCGCCGG TCGAACCGTG ATTATGATCG CACATCGGCC AAGTACGATG CGTCAAGTCG ATCAGAGGAT AGAGATGAAG GACGTGCTTG GTCGCGACGA CCGCTGA
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Protein sequence | MIVGLLAGYR SVLVLSAILS IFGTGLGLVP YLAAWRIAVA IQGAGIDAGE LVYWTVLAVC ALITKALLQA GATTLSHVAA YRILYQLRHR LVEKLARVPL GVLSGTTSGH LRKIVMEDVE QIEEGIAHAI PDLAAGLSVP ILSGVLLLWV DWRMGIAAVA MFPLLLGVYL LTLRATRPHL AAYVGAISNL RSISVQYVRG IREIRTFLHT GTILEELHDA LDRMARVGQS FALSSLTPMA ILYAGLRANV LVLIPVGAFL YLSDEISVTD LTLFLLLGLG INAPLLKVVF SAGNFFWKLK GASAQISTIF ETEELPQPEY PQRPDGYDIS FQDVSLSMDG NAILSRVSVT IPAGTTLALV GPSGAGKSTL ARLLMRSRDP DLGRILIGGC DLRQMEDRHL EGMVSAVLQD AWLMNATIYE NILSGRPTAS RKEVEAAARA ARVTEFSADL SFFVGEGGRS LSGGQRQRVA IARAILRSTP IVVLDEATAA LDPDNEQAVR EALAELAHGR TVLVIAHRLD TIRNADQIAF VEAGEISDLG SHSDLLQRSS GYRRLWKEYD SVEGWHLEPG AVRSLPTVVQ RPGQAYQEPG IPSGMVARFM HLAGPGRRTL MSKALPMLAL EGAVAGAPVI AVWLVLDRVL AGDLTRPFAV AASGFVALCI LMFVFANRLS HRVLWQVQST AVSALQARIA RQMRQIPLGD VIARDTGSLE ALMSQHSAAI NFVTPPALAM RAMVGPLLSA IVLFFLDWRL ALLTCAMVPA FGVVMVFADR VNARMLQRLV VSNEMLSARL LDYIQGLPTL RSLGLSQAYG PVEDALETHR RISLSTVTAL MPIVTAGWIF LDAGFVILLA GGGWMVLHEL MEASTFLLFL VVSLVFYAPL TDAFDLSSQL RLLQKSMSRV GEFLAIAPLP EPETPKLPVS LDLRFQDVHF SYGDKPVLSG INLDFPAGKI HALCGPSGSG KSTILDLIAR FWDVQKGHVT IGGVDIRDIA PELRSAMVAV VFQDSYLFDM SVARNLRLAR AGASDEELYA AAQAACCHDF IMALPKGYET VIGEGGAKLS GGERQRIALA RAFLKDAPII LLDEAAASVD PETESHMRQG LAKLCAGRTV IMIAHRPSTM RQVDQRIEMK DVLGRDDR
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