| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1420 |
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| Symbol | |
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| ID | 4580475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1387841 |
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| End bp | 1388830 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639768736 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_915217 |
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| Protein GI | 119384161 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAAT ATCAAGCACA TAGACTTGCT ATTGCGCCTA TGATGGACTG GACCGACAGC
CTGTGCCGCC GCATCCACCG GCTGCTGTCG CGCCGCGCGC TGCTTTATAC CGAGATGGTC
ACCGCTCCCG CGCTGGTTTA CGGCGACAGG GCAAAGCTTC TGGATTTCGA CGCGGGCGAG
CATCCCGTGG CGCTGCAACT GGGCGGCTCG GACCCGGCGC AACTGGCCGA GGCGGCGCGG
ATCGGCGCCG ACTGGGGCTA TGACGAGATC AACCTGAACG TCGGCTGCCC CAGCGACCGG
GTGCAGTCGG GCTGTTTCGG CGCCGTGCTG ATGACCCGGC CCGAACTGGT CGCCGAATGC
GTCGCGGCGA TGATCGCCGC CAGTCCGGTC GAGGTCACGG TGAAATGCCG CATCGGCGTG
GACGAACAGG ACCCTGAGGC GGTGCTGCCC GACTTCATCG CCCGCATGCG CGAGGCGGGC
GTGCGCCGCA TGACCGTCCA TGCCCGCAAG GCCTGGCTTC AGGGCCTGTC CCCGCGCGAG
AATCGCGAGG TGCCGCCGCT GGATTATCCG CTGGTGCATC GCATGAAGCA GGCGTTCCCG
GACCTGCACC TGTCGATCAA CGGCGGCATC GCCTCGCTTG ACGCCGTGCG CGATCATCTG
GCGGCGATGG ACGGCGTCAT GATCGGGCGC GCGGCCTATC ACCAGCCCTG GGACATGCTG
GGACAGGCCG ACCGGCTTTG GGGCGAGGAG CCACGCTTTG CCGATCCGCT GGAGGCGGCG
CGGGCGCTGC GCGATCTGGT CGAGGCGCAT CTGGCAACGG GCGGGCGGCT GCACCAGGCG
ACGCGGCACA TGCTGGGCCT GTTCCACGGC CGGCCCGGCG CACGCGGCTG GCGGCGGCAA
CTCTCCGAAG GCGCGTCGCG CGCCCGCGAC CGGGCCGAGG CGCTGGCGGT CTATGACGCC
GCGCTGGCCG AGGTCATGGC ACCGGCCTGA
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| Protein sequence | MTKYQAHRLA IAPMMDWTDS LCRRIHRLLS RRALLYTEMV TAPALVYGDR AKLLDFDAGE
HPVALQLGGS DPAQLAEAAR IGADWGYDEI NLNVGCPSDR VQSGCFGAVL MTRPELVAEC
VAAMIAASPV EVTVKCRIGV DEQDPEAVLP DFIARMREAG VRRMTVHARK AWLQGLSPRE
NREVPPLDYP LVHRMKQAFP DLHLSINGGI ASLDAVRDHL AAMDGVMIGR AAYHQPWDML
GQADRLWGEE PRFADPLEAA RALRDLVEAH LATGGRLHQA TRHMLGLFHG RPGARGWRRQ
LSEGASRARD RAEALAVYDA ALAEVMAPA
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