| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1413 |
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| Symbol | |
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| ID | 4581278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1381901 |
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| End bp | 1382533 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639768729 |
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| Product | cytochrome c biogenesis protein CcmA |
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| Protein accession | YP_915210 |
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| Protein GI | 119384154 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
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| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.767688 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.925167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCTGC TTGCCGTCCG CGACCTGGCC GTGGCGCGGG GCGGGCTGCG TGCCGTCGAA
GGCGTCTGCT TCAACCTGAA CGCCGGCGGC GCGCTGGTGC TGCGCGGGCC GAACGGCATC
GGCAAGACGA CGCTTCTGCG CACCCTGGCA GGGTTGCAGC CGCTGGTCTC GGGCGTGATC
GAGGCAGCAC CTGATGCCAT CGCCTATGCC GGCCATTCCG ACGGGCTGAA ACCGGCGCTG
ACCGTGACCG AGAACCTGCG CTTCTGGGCC GAGATCTTCG GCGGCCGGAA TATCGACGCC
GCGCTTGAGG CGATGAACCT GCGCGATCTG GCCAACCGTC CGGCCCATGC GCTTTCCGCC
GGGCAGAAGC GGCGGCTGGG GCTGGCGCGG CTGATGGTGA CGGGCCGCCC GGTCTGGCTG
CTCGACGAGC CGACGGTATC GCTCGACCGC GATTCGGTGG CGCTGTTCGC CGCCATGCTG
CGCGCCCATC TGGGCCGGGG CGGGGCGGCG GTGATCGCCA CCCATATCGA CCTGGGCCTG
CCCGAGGCCG AGATCCTTGA GCTTGGCCCC TTCCGCGCCA GCGAGCTGCG CCGGCAATCG
CGGCCGGCCG GCTTCAACGA GGCATTTGGA TGA
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| Protein sequence | MNLLAVRDLA VARGGLRAVE GVCFNLNAGG ALVLRGPNGI GKTTLLRTLA GLQPLVSGVI
EAAPDAIAYA GHSDGLKPAL TVTENLRFWA EIFGGRNIDA ALEAMNLRDL ANRPAHALSA
GQKRRLGLAR LMVTGRPVWL LDEPTVSLDR DSVALFAAML RAHLGRGGAA VIATHIDLGL
PEAEILELGP FRASELRRQS RPAGFNEAFG
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