Gene Pden_1404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1404 
Symbol 
ID4581269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1372781 
End bp1374172 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content71% 
IMG OID639768720 
Producthypothetical protein 
Protein accessionYP_915201 
Protein GI119384145 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.356706 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACTTA GCCGGGGCAG CGGCAACCGT TTTTCCGCCA CGATCTGGCC GGGCTTCGTC 
GATGCGATGA CGGCGCTTCT GATGGTCATG ATGTTCGTGC TGACCATCTT TCTGCTGGTG
CAGTCGGTGC TGCGCGACCA GATCACCACG CAGGACAGCG AACTCGATCA GCTGGGCCGG
CAGGTGGCCG AGCTTTCGGA TGCGCTGTCC ACCTCGCAGG CGCGGGCGGC CTCGCTGGAC
CGCGACCTGG GTGCCGAGCG CGAGCGGCTG CGGCGCTCCG AACAGGCCGT AACGGCCGCG
CGGGCCGAGA TCGACGCCCA GACCGAGGCC GCGCGACTGG CCGCCGCCCG GCGCGAGGCG
CTGGAGGCGC TGATCGGCGA CCTGCGGCGC CGGAACACCG AAACCCGGCA GCAACTGGAC
GAGACCGAGG CGGCCCGGCT GGCCGATGCC GCCGCGGCCG AGGCACTGCG CGAGCGGCTG
GCAAAGTCCG ACGCCGAACT GGACGCCACC ATGCTGGAAC TGGAGGCGGC GCGAAAGCAG
GCCGAGGAAA CCCTGACCCT GCTGGCCGCC GCCGAGACCG CCAAGCAGGA ATTGGACGAG
CAGGCCGAGG CCCGGGCCAG CGAGGCCGAG AAGCAGGCCG CCCTGCTGGC CCTGGCCCGG
CAGCAGCTAT CCGAGCAGGA GGCGCTGTCG GTCGAGGACC GACGCCGGCT TGCGGCGCTG
AACCAGCAGG TGGCGCAGCT CAACAGCCAG CTGGGCAGCC TGCGCGCCGT GCTGGATGCC
GCCGGAGAGG AGCGCCGCGA AGCCGATCTG CGCGCCGAGG ATCTGGGCCG GCAGCTGAAC
GTCGCCCTGC TGCGCGCCGC CGAAGAGGAA CGCAAGCGCC GCGCGCTGGA GGAAGAGGCG
CGCAGCAAGG CCGAAGCCGA GGCCAAGGAT CTGGCGCGCT ATCGGTCGGA ATTCTTTGGA
CGGCTGTCGC AGATCCTCGC CGGGCGCGAG GGGGTGCGGG TCGTGGGCGA CCGCTTCGTC
TTTTCCTCGG AGGTGCTGTT TGCGCCGGGC GAGGCGACAC TGTCGCCCGA AGGCCGGACA
CAGGTGGCGC GGGTGGCGGA CATGCTGAAA CAGATCTCCG GCGACATCCC GCCCGAGATC
GACTGGATGA TCCGCGTCGA CGGCCATACC GACAATCTGC CGCTGTCGGG GCAGGGGCGG
TATCGCGACA ACTGGGAACT CAGCCAGGCG CGGGCGCTGG CAGTGGTGCG CTATATGGTG
GACGACCTAG GCTTTCCGGC GACCCGCCTC GCGCCCGCCG GTTTCGCCGA TACCCGTCCG
GTGGCGCAGG GCGACGCGCC CGAAGCCCGC GCCCAGAACC GCCGCATCGA ATTGAAGCTG
ACCGAGCGCT AG
 
Protein sequence
MGLSRGSGNR FSATIWPGFV DAMTALLMVM MFVLTIFLLV QSVLRDQITT QDSELDQLGR 
QVAELSDALS TSQARAASLD RDLGAERERL RRSEQAVTAA RAEIDAQTEA ARLAAARREA
LEALIGDLRR RNTETRQQLD ETEAARLADA AAAEALRERL AKSDAELDAT MLELEAARKQ
AEETLTLLAA AETAKQELDE QAEARASEAE KQAALLALAR QQLSEQEALS VEDRRRLAAL
NQQVAQLNSQ LGSLRAVLDA AGEERREADL RAEDLGRQLN VALLRAAEEE RKRRALEEEA
RSKAEAEAKD LARYRSEFFG RLSQILAGRE GVRVVGDRFV FSSEVLFAPG EATLSPEGRT
QVARVADMLK QISGDIPPEI DWMIRVDGHT DNLPLSGQGR YRDNWELSQA RALAVVRYMV
DDLGFPATRL APAGFADTRP VAQGDAPEAR AQNRRIELKL TER