Gene Pden_1401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1401 
Symbol 
ID4581266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1371154 
End bp1371510 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content63% 
IMG OID639768717 
ProductDNA-directed RNA polymerase subunit omega 
Protein accessionYP_915198 
Protein GI119384142 
COG category[K] Transcription 
COG ID[COG1758] DNA-directed RNA polymerase, subunit K/omega 
TIGRFAM ID[TIGR00690] DNA-directed RNA polymerase, omega subunit 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0891188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCG TTACAGTCGA AGATTGCGTC GATAAGGTTC CGAACCGTTT TGACCTGGTG 
ATGCTGGCTG CCCATCGCGC ACGCGAAATC GCTGCCGGCA GCCCGCTGAC CGTCGATCGC
GACAACGACA AGAATCCCGT CGTCTCGCTG CGCGAGATCG CGGACGAAAC CCAGCCCGTG
GACGATCTGC GCGAGCGCAT GATCGAGGCC CAGCAGACCC AGATCGAGGT CGATGAGCCC
GAAGAGGATG CGATGGCGCT GCTGCTGGGT GCCGAGATGG ATCGTCCGAA ACCCGCCGAC
GAAGAGTCGG AGGAGCGCAT GCTGCGCATG ATGCTGGAAG CGCAGGGCAG GAACTGA
 
Protein sequence
MARVTVEDCV DKVPNRFDLV MLAAHRAREI AAGSPLTVDR DNDKNPVVSL REIADETQPV 
DDLRERMIEA QQTQIEVDEP EEDAMALLLG AEMDRPKPAD EESEERMLRM MLEAQGRN