Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1384 |
Symbol | |
ID | 4581307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 1352030 |
End bp | 1355647 |
Gene Length | 3618 bp |
Protein Length | 1205 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639768700 |
Product | ribonucleotide-diphosphate reductase subunit alpha |
Protein accession | YP_915181 |
Protein GI | 119384125 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.034072 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.508089 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGATCG AACGGCGCTT CACCACGGCC GAGAGCGGGG CTTACGGCGC GCTTTCCTTT ACCACCACCA CCAGCGAGAT CCGCAACCCG GACGGCACCG TCGTGTTTCG CAACGATTCG GTCGAGGTGC CGCAGGGCTG GAGCCAGGTC GCCTCGGACG TGATCGCCCA GAAATACTTT CGCAAGGCCG GCGTGCCGGC GCGTCTGAAG CGCGTCAAGG AGAAGGGCGT GCCGGAATTC CTGTGGCGCT CGGTCCCTGA CGAGGAGGCG CTGGCGAAAC TGCCCCAGGA GGCGCGCTTC GGCGGCGAGA CCAGCGCCCG CCAGGTCTTT GACAGGATGG CCGGCGCCTG GGCCTATTGG GGCTGGAAGG GCGGGTATTT TTCCAGCGAG GACGACGCCC GCGCCTATTA CGACGAGATG CGCCATATGC TGGCGGCGCA GATGGGTGCG CCGAACAGCC CGCAATGGTT CAACACCGGC CTGCATTGGG CCTATGGCAT CGACGGTCCC GGCCAGGGCC ATTTCTATGT CGATTACAAG ACGGGCAAGC TGGTCCGGTC GGACAGCGCC TATGAGCATC CCCAGCCCCA TGCCTGCTTC ATCCAGTCCG TCGCCGACGA CCTGGTGAAC GAGGGCGGCA TCATGGACCT GTGGGTCCGC GAGGCGCGGC TGTTCAAATA CGGCTCGGGC ACGGGCACCA ATTTTTCGTC CCTGCGAGGG GAGGGCGAGA AACTGTCGGG CGGCGGGAAA TCTTCGGGGC TCATGGGCTT CCTGAAGATC GGAGACCGCG CAGCCGGCGC GATCAAGTCG GGCGGAACGA CCCGGCGCGC GGCAAAGATG GTGATCTGCG ACATGGATCA CCCCGACATC GAGCAGTTCA TCAACTGGAA GGTCATAGAA GAGCAGAAGG TCGCCTCGCT GGTGGCGGGC TCGAAGATGC ATGAGCGCGA GCTGAATGCC ATCTTTGCCG CCATCCGCGA ATGGGACGGC AGCGTCGAGG ATGCCACCGA TCCGGCGAAG AATGCTGTGC TGAAATCGGC CATCCGTTCG GCAAAACGCG TGATGATCCC GGAGACCTAT ATCAACCGGG TTCTTCAATA TGCCCGGCAG GGCTTTGATT CGATTGAATT CCCGACCTAC GATACCGATT GGGACTCGGA AGCCTATGTC TCGGTCTCGG GCCAGAACTC CAACAACTCG GTGCGGGTGA CGGATGCCTT CCTGCGGGCC GTGCGCGACG ACCTGCCCTG GGAACTGGTC CGGCGCACCG ACGGCAAGGT GGCCAAGACC GTCTCGGCGC GCGAGCTATG GGACCAGATC GGCCATGCCG CCTGGGCCTG CGCCGATCCG GGCATCCAGT TCCACGACAC CGTCAACGCC TGGCATACCT GTCCCGAGGA CGGGGCGATC CGCGGCTCGA ACCCGTGCAG CGAATACATG TTCCTGGACG ATACGGCCTG CAACCTGGCC TCGATGAACC TGCTGAGCTT CTGGAGCGGC AAGGAATTCG ACGCCGACGG CTATGTGCAT GCCAGCCGGC TGTGGACAGT CACGCTGGAA ATCTCGGTCA TGATGGCGCA GTTCCCCAGC AAGGAGATCG CGCAGCGCAG CTATGATTTC CGCACCCTGG GCCTGGGCTA TGCCAATATC GGCGGGCTCT TGATGAACAT GGGCCTTGGC TATGACAGCG ACGAGGGCAG GGCGCTTTGC GGTGCGCTGA CTGCGGTCAT GACCGGGGTG AGCTATGCCA CCTCGGCCGA GATGGCGGCG GAACTGGGGC CGTTCCCCGG CTATGGCAAG AACGCCCAGC ACATGCTGCG GGTGATCCGC AACCACCGCG CGGCCGCCTA TGGCACAGGC GCCTATGAGG GCGTGAACGT GCGCCCGGTG GAACTGGATA CCGCGAACTG CCCCGATCCG CGCCTAGTGG CGCTGGCGCA GGGCGCCTGG GACGAGGCGC TGACGCTGGG CGAGGCGCAT GGTTATCGCA ACGCCCAGGC CACGGTGATC GCACCGACCG GCACCATCGG GCTGGTGATG GATTGCGACA CCACCGGCAT CGAGCCCGAT TTCGCGCTGG TGAAGTTCAA GAAGCTGGCC GGCGGCGGCT ATTTCAAGAT CATCAACCGC TCGGTCCCCG CTGCGCTGGA GACGCTGGGC TACGGCTCGG CCCAGATCGA GGAAATCATC GCCTATGCGG TGGGTCATGC CAGCCTTGGC AACTGCCCGG GCATCAACCA TGCCAGCCTG ATCGGCCACG GCTTCGGCCC GCGCGAGCTG GAAAAGGTCG ATGCGGCGCT GGCCTCGGCC TTCGACATCC GCTTCGTCTT CAACCAGTGG ACGCTGGGCG AAGCCTTCTG CCGCGAAACG CTGGGCATCC CGGCGGAAAG GCTGAACGAC CCGACCTTCG ACCTGCTGCG GCACCTGGGC TTTACCCGGG CGCAGATCGA TGCGGCGAAC GACCATGTCT GCGGCACCAT GACGCTGGAG GGCGCGCCGC ATCTGAAGCC CGAGCACTAT TCGGTCTTCG ACTGCGCCAA TGCCTGCGGC AAGAAGGGCA CGCGCTATCT GTCGGTGGAA AGCCATATCC GCATGATGGC GGCGGCGCAG AGCTTCATCT CGGGCGCGAT CTCCAAGACC ATCAACATGC CCAACTCGGC CTCCATCGCC GACGCGCTGG CCGCCTATGA GCTGAGCTGG TCGCTGGGCA TCAAGGCCAA TGCGCTTTAC CGCGACGGCT CGAAACTGTC GCAGCCGCTG GCCTCGGCGC TGGTCGAGGA CGACGAGGAG GCCGAGGAGA TCCTGGCCAC CGGCAGCGCG CAGGAAAAGG CCGCGGTCCT GGCCGAGAAG ATCGTCGAGC GGATCATCGT CAAGGAGGCG GTGCGCAACC ATCGCGAAAA GCTGCCGCAG CGCCGCAAGG GCTATACCCA GAAGGCGGTG ATCGGCGGGC ACAAGGTCTA TCTTCGCACC GGCGAATACG ACGACGGCAA GCTGGGCGAG ATATTCATCG ACATGCACAA GGAAGGCGCG GGCTTCCGGG CGATGATGAA CAATTTCGCC ATCGCCGTGT CGGTGGGCCT GCAATATGGC GTGCCGCTGG AGGAATTCGT CGACGCCTTC ACCTTCACCC GCTTCGAGCC GGCGGGCATG GTGCAGGGCA ATGACAGCAT CAAGAACGCG ACCTCGATCC TGGACTACGT GTTCCGCGAA CTGGCGGTCT CCTATCTGGA CCGCACGGAT CTGGCGCATG TGAAGCCGCA GGGCGCGCGT TTCGACGACC TGGGCGGCGG CGAGGCCGAG AGCCAGCCCA ATGTCGCGCC GGTCAGCGAG GGCGCCTCGC GTTCGCTGGA GATGCTCAAG CAGATCAGTT CGACCGGCTA TCTGCGCAAG CGGCTGCCGC AGGATCTGGT GGCGCTTCAG GCCGGCGTCT CGGTCGCGGC GGTCTCGACC GCAGAAGGGG CGGCGGCGGT GGGGGTCGTG ACCATGGACG CGCGTGCCAA GGCCCGGATG CAGGGCTATG AGGGCGATCC CTGCGGCGAA TGCGGCAACT ATACGCTGGT CCGCAACGGC ACCTGCATGA AGTGCAACAC CTGCGGCGCG ACCAGCGGTT GCAGCTGA
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Protein sequence | MRIERRFTTA ESGAYGALSF TTTTSEIRNP DGTVVFRNDS VEVPQGWSQV ASDVIAQKYF RKAGVPARLK RVKEKGVPEF LWRSVPDEEA LAKLPQEARF GGETSARQVF DRMAGAWAYW GWKGGYFSSE DDARAYYDEM RHMLAAQMGA PNSPQWFNTG LHWAYGIDGP GQGHFYVDYK TGKLVRSDSA YEHPQPHACF IQSVADDLVN EGGIMDLWVR EARLFKYGSG TGTNFSSLRG EGEKLSGGGK SSGLMGFLKI GDRAAGAIKS GGTTRRAAKM VICDMDHPDI EQFINWKVIE EQKVASLVAG SKMHERELNA IFAAIREWDG SVEDATDPAK NAVLKSAIRS AKRVMIPETY INRVLQYARQ GFDSIEFPTY DTDWDSEAYV SVSGQNSNNS VRVTDAFLRA VRDDLPWELV RRTDGKVAKT VSARELWDQI GHAAWACADP GIQFHDTVNA WHTCPEDGAI RGSNPCSEYM FLDDTACNLA SMNLLSFWSG KEFDADGYVH ASRLWTVTLE ISVMMAQFPS KEIAQRSYDF RTLGLGYANI GGLLMNMGLG YDSDEGRALC GALTAVMTGV SYATSAEMAA ELGPFPGYGK NAQHMLRVIR NHRAAAYGTG AYEGVNVRPV ELDTANCPDP RLVALAQGAW DEALTLGEAH GYRNAQATVI APTGTIGLVM DCDTTGIEPD FALVKFKKLA GGGYFKIINR SVPAALETLG YGSAQIEEII AYAVGHASLG NCPGINHASL IGHGFGPREL EKVDAALASA FDIRFVFNQW TLGEAFCRET LGIPAERLND PTFDLLRHLG FTRAQIDAAN DHVCGTMTLE GAPHLKPEHY SVFDCANACG KKGTRYLSVE SHIRMMAAAQ SFISGAISKT INMPNSASIA DALAAYELSW SLGIKANALY RDGSKLSQPL ASALVEDDEE AEEILATGSA QEKAAVLAEK IVERIIVKEA VRNHREKLPQ RRKGYTQKAV IGGHKVYLRT GEYDDGKLGE IFIDMHKEGA GFRAMMNNFA IAVSVGLQYG VPLEEFVDAF TFTRFEPAGM VQGNDSIKNA TSILDYVFRE LAVSYLDRTD LAHVKPQGAR FDDLGGGEAE SQPNVAPVSE GASRSLEMLK QISSTGYLRK RLPQDLVALQ AGVSVAAVST AEGAAAVGVV TMDARAKARM QGYEGDPCGE CGNYTLVRNG TCMKCNTCGA TSGCS
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