| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1382 |
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| Symbol | |
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| ID | 4581305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1349947 |
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| End bp | 1351491 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639768698 |
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| Product | protease Do |
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| Protein accession | YP_915179 |
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| Protein GI | 119384123 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.490263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.542535 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGAC CCTCTTCCCG CCATTTCCTG ACTGCGTCCA GCCTTGCCTT GCTCATGGCG
CTGACGCCGG CCTTCGCGCA GGAGCCGGCG ACGCCCGGCG CAGAGGCCGC ACAGGAAGCC
GCAAACAGCA ACGAGCCGCT GACCGCACCC GACAGCCAGG CGCGCCAGCA ACAGGTGATG
CCGGAAAGCT TTGCCGACCT GGTCGAAAAG GTCAGCCCGG CGGTCGTCAA CATCACCACC
ACCTCGACCG TTTCGACGCC CCTGGCGCGC GGGCCGCAAC TGCCCGAGGG CAGCCCGTTC
AGCGACCTGT TCCGCGAATT CGGCTTTCCG GGCTTCCCGC CGGGCGAGGG CAATCCCTTC
CAGCGCGGGC CGCAGCGCGA GCAACGCTCG AACGCGCTGG GTTCGGGCTT CGTCATCTCG
CCCGACGGGC TGATCGTGAC CAACAACCAT GTCATCGACG GCGCCGACGA GATCGAGGTC
GAGTTCTTTT CGGGAAAACG ACTGCCTGCC CAGGTGATCG GCAAGGACGA CAAGACCGAC
GTCGCCGTGC TCAAGGTCGA AAGCGACGAT CCCTTGCCCT TCGTCAAGTT CGGCGACAGC
GACAGGGCGC GGGTGGGCGA CTGGGTGCTG GCGCTCGGCA ACCCGCTGGG GCAGGGCTTT
TCGGCCTCGA CCGGCATCGT CTCGGCGCGC AATCGCGCAC TTTCGGGCAC CTATGACGAT
TTCATCCAGA CCGACGCGGC GATCAACCGG GGCAACTCGG GCGGGCCGCT CTTCAACCTG
GATGGCGAGG TGATCGGGGT GAACACCGCG ATCCTGTCGC CCAATGGCGG CTCGATCGGC
ATCGGCTTCT CGATGGCCTC GAACGTGGTC AGCAAGGTGG TCGAGCAGCT TGAGGAGTTC
GGCGAGACCC GGCGCGGCTG GCTGGGCGTC AAGATCCAGC CGGTGACCGA CGACATCGCC
GAATCGCTGG GCCTGTCCGA GGCCAAGGGG GCCATGGTCA CCGACGTGCC CGCCGGGCCG
GCCGCCGATG CCGGGATGAA GGCCGGCGAC GTCATCACCA GTTTCGACGG CGGCGAGGTC
AAGTATCCGC GCGATCTGGT GCGCCGCGTG GCCGACGCCC CGGTGGGTGA GGCGGTCGCG
GTCGTGGTCC AGCGCGAGGG CGAGCCGGTC GAGCTGCAGG TGACGCTGGG TCGGCGCGAG
CTGGCCGAGG GCACCGGCAG CGGCAAGGTC AGCAGCGCCG AGGAAACCGC GAGCGACGTG
ATGGGCATGA CGCTGGCACC GCTGACGCCG GAAATCGCCG CCGAGCTGGG GGTTTCGCGC
GACATGCAGG GGCTGGTCGT GCAATCGGTC GACCCAAGCG GCGCGGCCGC CGACAAGGGG
TTGGTCGCGG GCGATGTCAT CACCGAGGCG GGCCAGCAGC CGGTCGCGAC GCTGGCCGAT
CTGGAGGGGC GCATCAAGGA GGCGCGCGAG GCCGGGCGCA AGTCCATCCT GGTCATGGTG
CGCCGCGCGG GCGAGCCGCG CTTTGTCGCT CTGCCGGTGG GATGA
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| Protein sequence | MNRPSSRHFL TASSLALLMA LTPAFAQEPA TPGAEAAQEA ANSNEPLTAP DSQARQQQVM
PESFADLVEK VSPAVVNITT TSTVSTPLAR GPQLPEGSPF SDLFREFGFP GFPPGEGNPF
QRGPQREQRS NALGSGFVIS PDGLIVTNNH VIDGADEIEV EFFSGKRLPA QVIGKDDKTD
VAVLKVESDD PLPFVKFGDS DRARVGDWVL ALGNPLGQGF SASTGIVSAR NRALSGTYDD
FIQTDAAINR GNSGGPLFNL DGEVIGVNTA ILSPNGGSIG IGFSMASNVV SKVVEQLEEF
GETRRGWLGV KIQPVTDDIA ESLGLSEAKG AMVTDVPAGP AADAGMKAGD VITSFDGGEV
KYPRDLVRRV ADAPVGEAVA VVVQREGEPV ELQVTLGRRE LAEGTGSGKV SSAEETASDV
MGMTLAPLTP EIAAELGVSR DMQGLVVQSV DPSGAAADKG LVAGDVITEA GQQPVATLAD
LEGRIKEARE AGRKSILVMV RRAGEPRFVA LPVG
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