| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1381 |
|---|
| Symbol | |
|---|
| ID | 4581304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 1349084 |
|---|
| End bp | 1349872 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639768697 |
|---|
| Product | invasion associated locus B family protein |
|---|
| Protein accession | YP_915178 |
|---|
| Protein GI | 119384122 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5342] Invasion protein B, involved in pathogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0695092 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.770841 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGGAC CAAAGGAAGA GAACATGGTC AACAGGACAT CCGCGGCACT GGTTGCCGCC
CTCTTTGCGC TGGCGGGCAC GACCTCCGGC GTGATGGCGC AAGACGCAAG CACCGAGACT
CCGGCCCAGC CCGCTGCCGA GGCCCCCGCG GCCGAAGCGC CCGCAACCGA AACGCCCGCG
GCCGAAGCAC CTGCCGCCGA GCCGGCCGCC GAAGCGCCCG CTGCCGAGGC GCCTGCCGGC
GAAGCCGCAC CCGAGGCGCA GGCCGCCGAG AGCGACGAGC CGCAGGTCGG CCAGCCCTAT
GCCAGGTCGA CCCATGGCGA CTGGACGTTG CGCTGCATGA AGACCGAGGA CGGCAAGGAC
CCCTGCGAGC TCTACCAGCT GCTCAGGGAC GACAAGAATT CCCCGGTGGC CGAGGCTTCG
GTCATCCCGA TGACCGGCAA CGTGCAGGCC GTGATCACCT TCATCGCGCC GCTCGAGACC
GATCTTCAGG CCGGGCTTGG CCTTCAGGTC GATTCGGGCA AGGAATCGCG CTATCCCTTC
CTGCTTTGCG CCCAGGTCGG CTGCGTGTCG CGCATCGGCA TGGCCGAGTC CGATCTTGGC
CCGCTGAAGC GCGGCAAGGC TGCCACCCTC TCGCTGCTGC CCTTCGGCGC GCCGCAGGAA
CAGATGGTCA AGCTGCCGCT GTCGCTGAGC GGCTTCACCG CCGGCATGAA CGCGCTGGTC
GAGGCGAACA AGGATCTCGC CGCCGCGCCG GCTCCGGCTG CCGCTCCTGC CGAAGCGCCC
CAGCAATAA
|
|---|
| Protein sequence | MHGPKEENMV NRTSAALVAA LFALAGTTSG VMAQDASTET PAQPAAEAPA AEAPATETPA
AEAPAAEPAA EAPAAEAPAG EAAPEAQAAE SDEPQVGQPY ARSTHGDWTL RCMKTEDGKD
PCELYQLLRD DKNSPVAEAS VIPMTGNVQA VITFIAPLET DLQAGLGLQV DSGKESRYPF
LLCAQVGCVS RIGMAESDLG PLKRGKAATL SLLPFGAPQE QMVKLPLSLS GFTAGMNALV
EANKDLAAAP APAAAPAEAP QQ
|
|---|
| |