| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1376 |
|---|
| Symbol | |
|---|
| ID | 4579807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 1343653 |
|---|
| End bp | 1344600 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639768692 |
|---|
| Product | lipoyl synthase |
|---|
| Protein accession | YP_915173 |
|---|
| Protein GI | 119384117 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0320] Lipoate synthase |
|---|
| TIGRFAM ID | [TIGR00510] lipoate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGATA TGCCCCCGGT TCTGCGCCAC CCCGAAAAGG CCCATCGTCC CGACCAGCCC
CAGCCGAAAA AGCCGGACTG GATTCGTGTC AAGGCGCCGA CCAGCCAGGG CTACAAGGAC
ACCCGCGACA TCCTGCGCAA CAACCGCCTG TCCACGGTCT GCGAAGAGGC CGGCTGCCCG
AATGTCGGCG AATGTTGGAG CCAGGGCCAC GCCACCATGA TGATCATGGG CGAGATCTGC
ACCCGCGGCT GTTCCTTCTG CAACGTGATG ACCGGCAAGC CGAATGCGCT CGATGTGTTC
GAACCCGGCC GCGTCGCCCA TGCCGTGCAG AAGCTGGGGC TGAAGCATGT GGTCATCACC
TCGGTCGACC GCGACGACCT GGACGATGGC GGGGCCGAGC ACTTCGCCCA GACCATCCGC
GCCATCCGCC ACCGCTCGCC CGCATCCACC ATCGAGGTGC TGACCCCGGA CTTTCTCAAG
TCGAAGCCCG GCGCGCTGGA AGCGGTGGTC GAGGCGCGGC CCGACGTGTT CAACCACAAC
CTGGAAACCG TGCCCGGCCT CTATCCCACG GTCCGGCCCG GCGCGCGCTA TTTCCACAGC
CTGCGGCTGT TGCAGCAGGT CAAGGAACTC GACCCCGGCA TGTTCACCAA ATCCGGCATC
ATGGTCGGCC TGGGCGAGGA TCGCCAGGGC ATCCTGCAGG TCATGGACGA CATGCGCGCC
GCCGATGTGG ATTTCATCAC CATCGGGCAA TATCTGCAGC CGACGCCCAA GCATCATCGC
GTGGACCGCT TCGTCACGCC CGAGGAGTTC AAGGGCTATG AGAAGGCCGC TTATGGCAAG
GGCTTCCTGA TGGTTTCGGC GACGCCTCTG ACGCGCTCGT CCTACCACGC GGGCGACGAT
TTCGCCCAGT TGCGCGCGGC GCGGCTGGCG AAGCTGGGCC GTGCCTAA
|
|---|
| Protein sequence | MADMPPVLRH PEKAHRPDQP QPKKPDWIRV KAPTSQGYKD TRDILRNNRL STVCEEAGCP
NVGECWSQGH ATMMIMGEIC TRGCSFCNVM TGKPNALDVF EPGRVAHAVQ KLGLKHVVIT
SVDRDDLDDG GAEHFAQTIR AIRHRSPAST IEVLTPDFLK SKPGALEAVV EARPDVFNHN
LETVPGLYPT VRPGARYFHS LRLLQQVKEL DPGMFTKSGI MVGLGEDRQG ILQVMDDMRA
ADVDFITIGQ YLQPTPKHHR VDRFVTPEEF KGYEKAAYGK GFLMVSATPL TRSSYHAGDD
FAQLRAARLA KLGRA
|
|---|
| |