| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1365 |
|---|
| Symbol | |
|---|
| ID | 4579796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 1332053 |
|---|
| End bp | 1333486 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639768680 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_915162 |
|---|
| Protein GI | 119384106 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3800] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.26016 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGAG GCGAGAAACT GATCATCGGC CAGCGCCTGC GCGTGCTGCG CCAGTCGCTT
GGCCTGACCC AGGCGCAGAT GGCGGCCGAG CTGGGCGTCT CGGCCAGCTA TGTCACGCTG
ATCGAATCCG ACCAGCGCCC GGCCTCGGCG CGGTTCCTGA TGCGGCTGGC CGAGATCTAT
GACCTGAATA TCGCCGAACT GGCACCCTCG ACCGACGCGC AGCTTGCGGC GGATTTCGCC
GCGGCGCTGA AGGATCCGGT GCTGGAGGCG GGCGCACCGT CCCGCGCCGA GATCGAGGCG
GTGCTGCAAG CCTCGCCGCG GATCGCGGCG GCCTTCGTGC GGCTGCATGA CAGCCACCGC
CAGGCGCTGC TGCGCCCGCA GGCCGACGAC AACCCGCTGA CCGACCGAGA CAAGGTCGAG
GCGCTGGCCG GCACCTCGCG CCCGGTCGAT GCCGTGCGCG GCTGGTTCTA TGCCCGGCGC
AACCATGTCG ATGCGCTGGA CCGCGCCGCC GAGGCGCTGG CCGAGGAACT GGCGCTGCAC
CGCAACGAGC CGCATATGGC GCTGACCGGC CGGCTGGCCG CGCATGGCAT CGCGGTGCGC
ATCCTGCCAG CGCCGGTCAT GGGCGAGCAG TTGCGCCGCT TCGACCCGCA CCGGCGCGAG
CTGATGCTGT CGGAACTGCT GGCGCAATCC AGCCGCCGCT TCCAGATCGG CGTGCTGCTG
GCGCGGCTGG AGCAGGAACC GCTGATCGCC CGACTGGTCG ACGAGGCGGG ACTGGCCGAC
CCGCCGGCCG TCGCGCTGAT GCGGGTGAGC CTGGCGAATT ACTTCGCGGC GGCGCTGATG
ATGCCCTATG CCCGCTTCCT TGCCGCCTGC GAATCGGCGC GCTACGACGT GGAACTGCTG
GGCCACCGCT TCGGCGCCAG CTTCGAGCAG ACCGCGCATC GCATGTCCAC GCTGCAACGC
CCCGAGGCGC GGGGCATTCC GTTCTTCTTC GTGCGGGTGG ACCGGGCCGG GAACATCTCG
AAACGCTTCA GCGCCGGGCG GTTCCCGTTC TCGCGCTTCG GCGGCACCTG TCCCTTGTGG
AACATCCACG CTGCCTTCGA GACGCCGGAG CGGGTGCAGA CCCAGGTCAT CCGCATGCCC
GAGGGCGCCA GCTATTTCTC GATCGCGCGC ACGGTGACGC GGGCCGGCGG CACCCATGGC
GCGCCCGCGC AGCGGCTGGC GATCGGGCTG GGCTGCGACG TGGCCTATGC ACCGCGGCTG
GTCTATGCCG ACGGCATCGA CCTCGACCGC AGCCGGCCGG TGGACATCGG GCTGAACTGC
TATCTCTGCG AGCGGCCGGA TTGCTCGGCC CGCGCCCACG CGCCGATCAA CCGCCGGCTG
CGCGTCAACG AACGCGAGCG CAGCCTGGCG ATCTTCAGCT TCGAGGAGGG TTAG
|
|---|
| Protein sequence | MARGEKLIIG QRLRVLRQSL GLTQAQMAAE LGVSASYVTL IESDQRPASA RFLMRLAEIY
DLNIAELAPS TDAQLAADFA AALKDPVLEA GAPSRAEIEA VLQASPRIAA AFVRLHDSHR
QALLRPQADD NPLTDRDKVE ALAGTSRPVD AVRGWFYARR NHVDALDRAA EALAEELALH
RNEPHMALTG RLAAHGIAVR ILPAPVMGEQ LRRFDPHRRE LMLSELLAQS SRRFQIGVLL
ARLEQEPLIA RLVDEAGLAD PPAVALMRVS LANYFAAALM MPYARFLAAC ESARYDVELL
GHRFGASFEQ TAHRMSTLQR PEARGIPFFF VRVDRAGNIS KRFSAGRFPF SRFGGTCPLW
NIHAAFETPE RVQTQVIRMP EGASYFSIAR TVTRAGGTHG APAQRLAIGL GCDVAYAPRL
VYADGIDLDR SRPVDIGLNC YLCERPDCSA RAHAPINRRL RVNERERSLA IFSFEEG
|
|---|
| |