| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1364 |
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| Symbol | |
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| ID | 4579795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1330296 |
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| End bp | 1331918 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639768679 |
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| Product | malate synthase |
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| Protein accession | YP_915161 |
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| Protein GI | 119384105 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01344] malate synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.469671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTCG ACCGCAATGC CACCACGCTA CCGCCCGTCG TCCTGCGCGC CGTGCCGGGC
GCGGATCACG TCCTGACCCC CGAGGCGCTG GGTTTCGTCG CCGAATTGCA GGACCGCTTC
GGCCTGCGGC TGCATGCGCT GATGGTCGCC CGCGCCCGCC GGCAGGAGCG CATCGACCGG
GGTGAGTTGC CCGACTACCT GCCGCAGACG CGCGAGATCC GGCAGGGCAT CTGGCAGGCC
GCCCCCGTCC CGCCGGCGCT GGAGGATCGC CGGGTCGAGA TCACCGGCCC GGTGGATCGC
AAGATGATGA TCAACGCGCT GAACTCGGGC GCCCGGGTCT TCATGGCCGA TTTCGAGGAC
GCGACCGCGC CCAGCTTCGC CAATATCATC GCCGGGCAGG CGAACCTGAT CGACTATCGC
GACGGCACGC TGGAGCATGA CGACTCTGCC ACCGGCAAGA GCTATCGCGT CGGCCCCCGC
CCGGCGCTGC TGATCGTCCG CCCGCGCGGG CTGCACCTGC CCGAGGCGAA TGTGCTGATC
GGCGGCCAGC CGGTCTCGGC GGCGCTGTTC GATTTCGGCC TGTCGCTTTA TCACTGCGGC
CGGGCGCTGG CCGCCACCGG GCGCGGGCCG TTCTATTACC TGCCCAAGCT GGAGGGCCAT
GGCGAGGCGC GGTTCTGGAA TGAGGTCTTT GCCTTTGCCC AGGACCGCAT GGGACTGGCG
CAGGGCACGA TCAAGGCCAC CGTGCTGATC GAGACCCTGC CCGCCGCCTT CGAGATGGAC
GAGATCGTCT GGGAACTGCG CGACCACATC GCCGGGCTGA ATTGCGGCCG CTGGGACTAT
ATCTTCAGCT ATATCAAGAC GCTGCGCAAT CATCCGGCCT ATGCGCTGCC CGACCGGGCG
CAGGTCGGGA TGGAGAATGC CTTCCTGGCC GCCTATGCCG CCCGCGTGGT CAAGGTCTGC
CATCGCCGCG GCATCCATGC CATGGGCGGC ATGTCGGCGG CGATCCCGGT CCGGGGCGAT
GCCGAGGCCA ACGAGGCCGC CTTTGCCCGC GTCCGCGCCG ACAAGCAACG CGAGGTCGGC
ATGGGCTTCG ACGGCTGTTG GGTCGCGCAT CCCGACCTGG TGCCGGTGGC GCAGGCGGTC
TTCGACGCCG CCATGCCCGG TCCGAACCAG ATCCGCAAGC CGCGCCAGCA ATGGCGCATC
GAGCCCGCGA TGCTGCTGAA ACCCCATCGG GGCCGGATCA CCGAGGCGGG CGTGCGGCTG
AATATCGAGG TCGCCGTCGA ATACCTGGCG CAATGGCTGT CCGGCCGCGG CGCGGTGCCG
ATCCAGAACA TGATGGAGGA TGCCGCCACC GCCGAGATCA GCCGCGCCCA GCTGTGGCAA
TGGCTGCGCC ACGGCGCCCC CGTCGTGCTG GAGAACGGCG AAGAGCGCCG GTTGACCGCC
GAATGGCTGG GCGAGTTGAT GCAGGCCGAG ATCGTCCGCA TCCTCGACCG GCTGGGCCCG
AACGGGTTCC ATCGCGGCCA TTACGCCAGC GCCGCGCGTA TCGTGCAGGA GGCCGCGACG
GCCGAGACCC TGCCCGATTT CATCACCGTC CCGGCCTACG ACGTGCTGAA CGCGCTGGAC
TGA
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| Protein sequence | MPLDRNATTL PPVVLRAVPG ADHVLTPEAL GFVAELQDRF GLRLHALMVA RARRQERIDR
GELPDYLPQT REIRQGIWQA APVPPALEDR RVEITGPVDR KMMINALNSG ARVFMADFED
ATAPSFANII AGQANLIDYR DGTLEHDDSA TGKSYRVGPR PALLIVRPRG LHLPEANVLI
GGQPVSAALF DFGLSLYHCG RALAATGRGP FYYLPKLEGH GEARFWNEVF AFAQDRMGLA
QGTIKATVLI ETLPAAFEMD EIVWELRDHI AGLNCGRWDY IFSYIKTLRN HPAYALPDRA
QVGMENAFLA AYAARVVKVC HRRGIHAMGG MSAAIPVRGD AEANEAAFAR VRADKQREVG
MGFDGCWVAH PDLVPVAQAV FDAAMPGPNQ IRKPRQQWRI EPAMLLKPHR GRITEAGVRL
NIEVAVEYLA QWLSGRGAVP IQNMMEDAAT AEISRAQLWQ WLRHGAPVVL ENGEERRLTA
EWLGELMQAE IVRILDRLGP NGFHRGHYAS AARIVQEAAT AETLPDFITV PAYDVLNALD
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