Gene Pden_1362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1362 
Symbol 
ID4579793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1327101 
End bp1328108 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content65% 
IMG OID639768677 
Productperiplasmic binding protein 
Protein accessionYP_915159 
Protein GI119384103 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGAC TCACCACGGC GCTCGTCGCC ACCTTTGCCC TGGCGCCGAT GGCACTGGCG 
GGCACCGAAT ACCCGCTGAC CCTGACCAGT TGCGGCCACG AGGTCACCTT CGAGGCGGCG
CCGGAAAGCG TTGTCAGCGT CGGGCAAAGC ACGACCGAGA TCCTCTATAT GCTGGGTCTT
GGCGACAAGG TGGCGGGCAC GGCGCTGTGG ATCAACCCGG TCCTGCCGGA GTTCGCCGAA
GTCGACGCCA AGGTCGAGCG CCTGTCCGAC AACGCCCCCA GCTTCGAGAG CGTGCTGGCG
AAGAAGCCGG GCCTGGTGGT CACCGCCTAT GAATGGATGA TCGGGCCGCA AGGCGCGATC
GGCACGCGCG AGATGTTCGA TGACGCGCAG ATCCCCAGCT GGATCATGCC CACCGAATGC
ATCGGCAAGG ACAATACCCA AAGCATGGAC GGCGCTCGCA CGGTCATGTT CGACACCGCG
CTGCTCTATC AGGGGATCGA GGAACTGGCG ACGATCTTCG ACGTCCAGGA CCGCGGCGCG
GAGGTGATCG CCGACCTCAA GGCGCGCGAG GCGGCGGCGG TCGAAAAGGC GCAGGGGTTG
AACCTGCCCC AGGACGTATC GGGCCTGTTC TGGTATTCCT CGGCCGATAT CGAGATCGAC
CCCTATGTCG CGGGCGTGAA TGCGGCGCCG GGCTGGATGC TGTCCAAGCT GGGGGTGAGG
AACGTCATCA CCTCGCAAGA GGAATGGCCG ACCGTGGGCT GGGAGACCAT CGCCAAGGCC
GACCCCAGCT TCATCGTCGC CGCCGAGATG AACCGCCGCC GCTTCCCGGC CGATGACATC
GCCGTCAAGC GCGAGTTCCT GACCTCGGAC CCGGTGACTG CCGAGATGGA GGCGGTGAAG
AACGACCGCA TCCTGACCAT GCCGGCGAAT GCGATGGACC CCTCGGTCCG CACGATCTAC
GCGCTGGAAT CGCTGGCGGA TTCGCTGGCC GGGTTCGATC TGAAATGA
 
Protein sequence
MLRLTTALVA TFALAPMALA GTEYPLTLTS CGHEVTFEAA PESVVSVGQS TTEILYMLGL 
GDKVAGTALW INPVLPEFAE VDAKVERLSD NAPSFESVLA KKPGLVVTAY EWMIGPQGAI
GTREMFDDAQ IPSWIMPTEC IGKDNTQSMD GARTVMFDTA LLYQGIEELA TIFDVQDRGA
EVIADLKARE AAAVEKAQGL NLPQDVSGLF WYSSADIEID PYVAGVNAAP GWMLSKLGVR
NVITSQEEWP TVGWETIAKA DPSFIVAAEM NRRRFPADDI AVKREFLTSD PVTAEMEAVK
NDRILTMPAN AMDPSVRTIY ALESLADSLA GFDLK