Gene Pden_1360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1360 
Symbol 
ID4580611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1325264 
End bp1326034 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content72% 
IMG OID639768675 
ProductABC transporter related 
Protein accessionYP_915157 
Protein GI119384101 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGC CTCTGGAACT CGACGGCGCG GGCCGCCGGG TGCAGGGGCG CGACATCGTC 
GCCGATGTCA GCCTGTCGCT GCAACCGGGC GAGATGCTGG GCCTGATCGG GCCGAACGGC
TCGGGCAAAT CGACGCTGCT GAACCTGATG GCGGGGCTGA TGCGGCCCTG CCGGGGCGAG
GTCCGCTTGA ACGGCCAGCC GATGGCCCGC CTGCGCCGCC GCCAGATCGC GCAGCGCCTG
GCGCTGGTGG CGCAATCCGC CGACACGGGC GACCGCATCA CCGTGCGCGA GGCGGTCGAG
CTTGGTCGCA CCCCTTGGCT GGACCCGCTG CGGCCCTGGA GCCCCCGCGA CGACGCCGCC
GTCGCCGCCG CGCTAAAGGC AGTGGACATG GCGCATATGG CCGCGCGCGA CTGGTCCTCG
CTGTCGGGGG GCGAGCGCCA GCGCGCCCAT ATCGCCCGCG CCCATGCCCA AAGCCCGCAG
ATCCTGCTGC TGGACGAGCC GACCAATCAC CTGGACATCC ACCACCAGCT TGGCATCCTC
GACCTGGTGG CCGGGCTGGG CACCACCACC GTCATCGCGT TGCACGACCT GCACCATGCC
TTGCGCTGCG ACCGGGTGCT GGTGATGCAG GCGGGCCGCT GCGTGGCGCT TGGCCCGCCC
GCCGAAACCC TGACCCCCGC GCTGATCCGC GAGATCTTCG CCATCGAGGC CGAACTGATC
CTCCATCCCG GCGGCGCGCG CCCGGTCTTC GCCTTCCAAC GCCTTTCGTG A
 
Protein sequence
MTPPLELDGA GRRVQGRDIV ADVSLSLQPG EMLGLIGPNG SGKSTLLNLM AGLMRPCRGE 
VRLNGQPMAR LRRRQIAQRL ALVAQSADTG DRITVREAVE LGRTPWLDPL RPWSPRDDAA
VAAALKAVDM AHMAARDWSS LSGGERQRAH IARAHAQSPQ ILLLDEPTNH LDIHHQLGIL
DLVAGLGTTT VIALHDLHHA LRCDRVLVMQ AGRCVALGPP AETLTPALIR EIFAIEAELI
LHPGGARPVF AFQRLS