Gene Pden_1349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1349 
Symbol 
ID4580602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1315624 
End bp1316025 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content67% 
IMG OID639768667 
Productthioesterase superfamily protein 
Protein accessionYP_915149 
Protein GI119384093 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.120943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCC CAACCTGCAT GGTCGAGATG ATCTTTCCCG AACAGGCGAA CCATTACGGC 
ACGCTGTTCG GCGGCAATGC CCTGGCCCTG ATGGCCAAGG CGGCTTTCGT CGCGGCGGCC
CGGCATGCGG GCATGTCGGT GGTCATGGCG CGCTCGGAAC GGGTCGATTT CGCGACGCCG
GTGCGCGTGG GCGAACTGCT GGAGCTGCAG GCCCGCGTCA TCCGCACCGG GCGCAGCTCG
ATGACCGTCG AGGTCTCGGC CGAGGCCGGG GAACTGACCG GCGCGCTGCG GCGCGAGGTG
CTGCGCGGAC GGTTCGAGAT GGTGGCGGTG GATGCGGACG GTCGCCCGCA ACCCATCGCA
CGGAAGAATT GCAACGAAGG AACAGACAAT GATCACGCAT GA
 
Protein sequence
MPAPTCMVEM IFPEQANHYG TLFGGNALAL MAKAAFVAAA RHAGMSVVMA RSERVDFATP 
VRVGELLELQ ARVIRTGRSS MTVEVSAEAG ELTGALRREV LRGRFEMVAV DADGRPQPIA
RKNCNEGTDN DHA