Gene Pden_1336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1336 
SymbolhisI 
ID4579439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1302938 
End bp1303402 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content66% 
IMG OID639768655 
Productphosphoribosyl-AMP cyclohydrolase 
Protein accessionYP_915137 
Protein GI119384081 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0139] Phosphoribosyl-AMP cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTCT TTTCTCCCCG CCTCACCGTC GCGCAGGTCG AGGAAGGCCA TGCGCTGGCT 
CCGAAATTCG ATGCCGCCGG GCTGATCCCG GTCGTCACCA CGGATGCCGC GACCGGCGAG
GTGCTGATGA TGGGCGTGAT GAATGCCGAG GCGCTGACGC GCAGCATCGC AACCGGCGAG
GCGCATTACT GGAGCCGTTC GCGGCAACGC CTGTGGCACA AGGGCGTGAC CAGCGGCCTG
ATCCAGAAGA TCGTCGAGAT GCGGATCGAC GACGATCAGG ACGCGATCTG GCTGCGGGTG
CAGGTTGCCG GAGGCGCAAG CTGCCATGTC GGCTATCGCT CCTGCTTCTA TCGCGCGGTG
CCGCTGGGCG GGGTCGGTGC GCCCGAGCTG CGCTTCACCG AGTCCGAAAA GCTTTTCGAT
CCTGCCGAGG TCTATGGCGA TGCGCCCAAT CCAACCCAGC TCTGA
 
Protein sequence
MPLFSPRLTV AQVEEGHALA PKFDAAGLIP VVTTDAATGE VLMMGVMNAE ALTRSIATGE 
AHYWSRSRQR LWHKGVTSGL IQKIVEMRID DDQDAIWLRV QVAGGASCHV GYRSCFYRAV
PLGGVGAPEL RFTESEKLFD PAEVYGDAPN PTQL