| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1325 |
|---|
| Symbol | |
|---|
| ID | 4579428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 1292967 |
|---|
| End bp | 1294022 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639768644 |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_915126 |
|---|
| Protein GI | 119384070 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTGC TGGAAATCCG CGACCTGAAC GTGCGCTTCG CCACCACCGA CGGCGAGGTC
TCGGCCGTGA ACGGCATCGA CCTGGACGTG GAACGCGGCC AGACGCTGGG CATCGTCGGC
GAGTCGGGCT CGGGCAAGTC GCAGCTTGCC TTTGCCGTCA TGGGCCTGCT GGCCAGGAAC
GGCCGCGCCG CGGGCTCGGT CCGCTTCGAC GGGGCCGAGA TCCTGAACGC GACCCCGAAG
GTGCTGAACA GGATCCGCGC CCGCCGCATC GCCATGGTGT TCCAGGACCC GATGACCAGC
CTGAACTCCT ATATGCGCGT CTCGGACCAG ATGGCCGAGG TCTTGATGCT GCACAAGGGC
ATGGGCAAGC GCGAAGCGGT GGCCGAGGCC GCGCGCATGC TCGACGCCGT GAAGATCCCC
GATGCGCGGG GCCGCATCCG GCTTTACCCG CACGAGTTTT CCGGCGGGAT GCGCCAGCGG
GTGATGATCG CCATGGCGCT GCTCTGCCGC CCCGAACTGC TGATCGCGGA CGAGCCGACC
ACGGCGCTGG ACGTGACCGT GCAGGCGCAG ATCATGGAGC TGCTGGCCGA TCTGCGCCGC
GAATTCGGCA TGGCGATGAT CCTGATCACC CATGACCTGG GCGTGGTCGC GGGCGCTTGC
GAACGGGTGA TGGTCATGTA TGGCGGCAGG GTGATGGAGC GCGCGCCGGT CGGGCCGGTC
TTTGCCGATC CCGCGCATCC CTATACCCAG GGTCTGCTGG CGGCGATCCC GCGACTGGAC
CAGCAGGGCG AGCAGTTGGC CGCGATTCCC GGCAGCCCGC CCAACATGAC CAACCCGCCC
CCCGGCTGCC CCTTTGCGCC GCGCTGCGCC TATGTCATGC CGGTTTGCGA AACCATGCCG
CCGTTCGACC CCTTTGCGCC GGGGCGCGAG CGCGCCTGTC ATGCCGGCCT TGCCACGGTG
CGCGCCGGCC ATGCGCCGCA GCCCGACCTG CCCGAACCCG CCGCCGCCGA TCTGGACGAG
ATGCCGGCAA GCGTCCTCCA GGAGGCCCGG CCATGA
|
|---|
| Protein sequence | MALLEIRDLN VRFATTDGEV SAVNGIDLDV ERGQTLGIVG ESGSGKSQLA FAVMGLLARN
GRAAGSVRFD GAEILNATPK VLNRIRARRI AMVFQDPMTS LNSYMRVSDQ MAEVLMLHKG
MGKREAVAEA ARMLDAVKIP DARGRIRLYP HEFSGGMRQR VMIAMALLCR PELLIADEPT
TALDVTVQAQ IMELLADLRR EFGMAMILIT HDLGVVAGAC ERVMVMYGGR VMERAPVGPV
FADPAHPYTQ GLLAAIPRLD QQGEQLAAIP GSPPNMTNPP PGCPFAPRCA YVMPVCETMP
PFDPFAPGRE RACHAGLATV RAGHAPQPDL PEPAAADLDE MPASVLQEAR P
|
|---|
| |