Gene Pden_1324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1324 
Symbol 
ID4579427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1291957 
End bp1292970 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content68% 
IMG OID639768643 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_915125 
Protein GI119384069 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA AGCCGCTGAT CCAGGCGCGC GACCTGCGCG TCAGCTTCCA GCTTCCCGCG 
CAAGGCGCGC TCCCTTGGGC CAGGCCGCGG CTGCTGCATG CCGTGGGCGG GGTGGATTTC
ACCCTGATGC CGGGCGAGAC GCTGGGCATC GTCGGCGAAT CCGGCTCGGG CAAATCGACC
CTTGCCCGGG CGCTGATCGG CCTTGTCCCG GCGACGGGAC AGGCGATCTG GCAGGACGGC
ACCGACCTGA TCGGCCTTTC CGCGCGCAGG ATGCTGAAAT ATCGCAGCCA GATCCAGATG
GTGTTCCAGG ACCCGCTGGC CAGCCTGAAC CCGCGCATGA CCGTCGGCCA GATCATCGCC
GAGCCGCTGA CCACCCATCA CAAGGGCCTG GGCCGCGACG AGGTCAAGGT CCGGGTCAAG
GACATGATGG ACCGCGTCGG CCTGCTGCCG AACCAGATCA ACCGCTATCC GCACGAGTTC
AGCGGCGGCC AGTGCCAGCG CATCGGTATC GCCCGGGCGC TGATCGTCCA GCCCAAGCTG
GTGATCTGCG ACGAGCCGGT CTCGGCGCTG GACGTCTCGA TCCAAGCGCA GGTCATCAAC
CTGCTGGACG AGTTGCAGCG CGATCTTGGC CTGGCGCTGA TCTTCATCGC CCATGACCTG
TCGGTGGTAA AGCATATCAG CGACCGGGTG CTGGTGATGT ATCTTGGCCG GGTGATGGAA
CTGGCCGAAT CGCAGGCGCT TTACGCCGAG CCGCGCCATC CCTATACGCA GGCGCTGCTT
TCGGCCGTGC CGATCCCCGA CCCCCAGCTT GAGCGCGACA AGCGGATGAT CCCGCTGCGG
GGCGAGCTGC CCTCGCCGAT GAGCCCGCCC TCGGGTTGCG TCTTCCGCAC CCGCTGTCCG
CGCGCCGAGG CCCTTTGTGC CAGCGAAAGG CCGGCGCTAG GGAGCGGCGC GCATCTGACC
GCCTGCCATT TCCCCGGCGC GCTGCGCCCC GAGGAACTGG CGATCAAAGC CTGA
 
Protein sequence
MTAKPLIQAR DLRVSFQLPA QGALPWARPR LLHAVGGVDF TLMPGETLGI VGESGSGKST 
LARALIGLVP ATGQAIWQDG TDLIGLSARR MLKYRSQIQM VFQDPLASLN PRMTVGQIIA
EPLTTHHKGL GRDEVKVRVK DMMDRVGLLP NQINRYPHEF SGGQCQRIGI ARALIVQPKL
VICDEPVSAL DVSIQAQVIN LLDELQRDLG LALIFIAHDL SVVKHISDRV LVMYLGRVME
LAESQALYAE PRHPYTQALL SAVPIPDPQL ERDKRMIPLR GELPSPMSPP SGCVFRTRCP
RAEALCASER PALGSGAHLT ACHFPGALRP EELAIKA