Gene Pden_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1313 
Symbol 
ID4579494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1277063 
End bp1277941 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content74% 
IMG OID639768632 
Producthypothetical protein 
Protein accessionYP_915114 
Protein GI119384058 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.266881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGAA AACTCTCGAC CTCGATCGCG CTTTCGGCAC TGCTGGCGGT GCTGGGGGCC 
CCGGTGCTTG CGCAAGACAC GCCCGCCGCC CCGCCGCCCG CGGCCGAGGC CCCGGCGCCG
GTCGTGCTGC CCCAGGCATT GCAGGATGCG GGGCTGAGCG ATGTGACCAG CAAGCGCGGT
CCGCGCGGCG CGACCCGGAT CGAGGGCAAG CTGCCCGACG GCACGCAGAT CGACGCCATG
CTGGACGCCA AGGGCCAGTT GCGCGGCCTG CGTGCCCGGG GCGATGCGGC GCTGCCGCAG
GCGCTTATCG ACCAGTTGGT GCCGCAGGCC GTGCGCGACA GCGCGGTCTT TGGCGAGCTG
GGCACGCTGA AGGCGGTGTT CACGGGCGAG CGCGGGGTGA TGCTGGCCGG GCAGGATGCC
GACGGAAACA AGCTGCGCGC CGCCTTTGCC CAGGACGGCA CCCTGCTGCG CTTTGGCCGG
GGCGATGCGG GGCGCGACGG TGAACGGCAT GGCAAGCGCC AGGACGACCG CCGGGACAAG
GGCTACCATC ACCGCGGCCA CGACAAGCGC GACGGCCATC GCGGCTGGCA CCACGGCCCG
CGCGGGGACC GCAGTGGCGA GAAGGGCGCG CCGCCGCCCG CTGGCGCCGC GCCCGAGGCT
CCCGCCGCGG ATGCGCCGCA GCGCCAGGGT GCGCTGTCTC CGACGCGACT CGACCGGGGC
GAGGTGCGCA TGGCGCTGAC CTCGGCCGGC TACAGCCGTA TCGGCGAGAT CCTGCAGGAC
GGCCCGCGCG TCGTGGCGCA GGCGGTGAAC CCCGAGGGCG AGCCCGTCGC GGTCGAACTG
AACCCGAAGG GGCAGGTCAT GCGGGAAATC AACCGCTAA
 
Protein sequence
MSRKLSTSIA LSALLAVLGA PVLAQDTPAA PPPAAEAPAP VVLPQALQDA GLSDVTSKRG 
PRGATRIEGK LPDGTQIDAM LDAKGQLRGL RARGDAALPQ ALIDQLVPQA VRDSAVFGEL
GTLKAVFTGE RGVMLAGQDA DGNKLRAAFA QDGTLLRFGR GDAGRDGERH GKRQDDRRDK
GYHHRGHDKR DGHRGWHHGP RGDRSGEKGA PPPAGAAPEA PAADAPQRQG ALSPTRLDRG
EVRMALTSAG YSRIGEILQD GPRVVAQAVN PEGEPVAVEL NPKGQVMREI NR