Gene Pden_1310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1310 
Symbol 
ID4579491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1274539 
End bp1275879 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content73% 
IMG OID639768629 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_915111 
Protein GI119384055 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.741916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCCTGC CGCGCGATTC GATCCGCGCG CGGCTGATCG CGCTGGCGGC GCTGCTGACC 
GGCGTGGCGC TGGTCGGCGG CTACCTGGCC ATCGCCGCGA TCCTCGAGGA TTTCATCACC
GGCCGCTTCG ACGCCGAGAC CGAGGCGGTG GCCGATGCGC TGATCGCCGG GGCCACCATC
GACGCCGAGG GCAGGCTGGC CGCCGGTCCC GGCCCGGCCG ATCCGCGTTT CCAGATGCCG
CTTTCGGGCT GGTTCTGGCA GTTGACGCAG GACGGCCAGG TGATGGCGAA ATCGCCCTCG
CTTTTCGACA ACGTGCTGAA CCCGCCCGAG GCGGATTTCC AGGGTGGCCC CGGCCTTGGC
CCGGCGGGAG AGCCGCTGCG GGTTGCGCGC CACGCCTTCA CCCTGCCCGA TTCCGCCTCG
GCGCTGGCCG TGACCGTGAC CGCCCCCCGG GCCGAGATCG ACGCCGCCAT GGCGCGGCTG
CGCCGGCCGC TGGCGGTCTC GCTTGCCGTG CTGGGGCTGG CCCTGGCGGC GGCAAGCGTG
CTGCAGGTCG TGGCGGGGCT GCAAAGCCTC GACCGGCTGG GCCGCGACCT GCGCCGCATC
CGCTCGGGCC AGGCCGAGGC GCTGCCCCTG CCCGCCGTGG CCGAGCTGCG CCCCGTCGCC
ACCGAGATCA ACGCGCTCCT GGAACAGAAC CGCGCCGTGC TGGCGCGCGC ACGCGAACAT
GTCGGCAATC TGGCGCATTC GCTCAAGACG CCGCTGGCGG CGCTGGACAA TGCGCTGCCG
TCCGAGCATC CGGGCCATGG GCTGATCGCG CGCATGGACC GCCAGATCGG CTGGCACCTG
CGGCGCGCCC GCAGTTCGGC CGCGCCGCGG CTGCTGGGCC AGCGCACGCC GGTCGCGCCG
GTGATCCAGG ACATCCTTCT GGTGCTGGGC GGTCCGATCC GCGATTCGGG CCTGCGGGCC
GAGATCCGGG CCGATGCCGA CCCCGCCTTT GCCGGTGAGC GGCAGGATCT TGAGGAAATG
ATCGGCAACC TGGTCGAGAA CGCGGTGAAA TGGGCCAAGG ACCGGGTCCG CATCACCGTC
CTGCTCCAGG GCGACCAGTT ACGCATCCTG ATCGAGGACG ACGGCCCGGG CATGTCGGAC
GAGGATCACG CGCGCGCCCT GACCCGCGGC GCACGGCTTG ACGAGACCGG CCCTCCGGGC
ACCGGCCTCG GCCTTGCCAT CGTCGCCGAT CTGGCCGCGC TGCATGGTGG GGCACTGGTG
CTGGAGGGCT CGGACCTGGG CGGGCTTTGT GCCGGGCTGC GGCTGCCGGC CGCCGCCCCG
CCGGTTGCAC GGCGCGGCTA G
 
Protein sequence
MILPRDSIRA RLIALAALLT GVALVGGYLA IAAILEDFIT GRFDAETEAV ADALIAGATI 
DAEGRLAAGP GPADPRFQMP LSGWFWQLTQ DGQVMAKSPS LFDNVLNPPE ADFQGGPGLG
PAGEPLRVAR HAFTLPDSAS ALAVTVTAPR AEIDAAMARL RRPLAVSLAV LGLALAAASV
LQVVAGLQSL DRLGRDLRRI RSGQAEALPL PAVAELRPVA TEINALLEQN RAVLARAREH
VGNLAHSLKT PLAALDNALP SEHPGHGLIA RMDRQIGWHL RRARSSAAPR LLGQRTPVAP
VIQDILLVLG GPIRDSGLRA EIRADADPAF AGERQDLEEM IGNLVENAVK WAKDRVRITV
LLQGDQLRIL IEDDGPGMSD EDHARALTRG ARLDETGPPG TGLGLAIVAD LAALHGGALV
LEGSDLGGLC AGLRLPAAAP PVARRG