| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1308 |
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| Symbol | |
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| ID | 4579489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1271560 |
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| End bp | 1273785 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639768626 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_915109 |
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| Protein GI | 119384053 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.948841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCAGA TTGACCCAGG CAGGAACAAA GGTGAAACCA TGGGCCACAA CAACACCAAC
GCCCCCGTCG CGCGCTTTCC CGAGGTGAGC CGGCCCAAGC TCGAGGGCGG CAAGCGCTTC
GTCATGCGTT CCGAGTTCCA GCCGGCGGGC GACCAGCCCA CCGCCATCGC CGAACTGTCG
CAGGGCGTGC GGGCGGGCGA ACGCGACCAG GTGCTGCTGG GCGCCACCGG CACCGGCAAG
ACCTTCACCA TGGCCAAGGT AATCGAGCAA ACCCAGCGCC CGGCGATCAT CCTGGCGCCC
AACAAGACGC TGGCCGCGCA ATTATACGGC GAGTTCAAGG GCTTCTTCCC CGAAAATGCC
GTGGAATATT TCGTCAGCTA TTACGACTAC TACCAGCCCG AAGCCTATGT CGCGCGTTCC
GACACCTATA TCGAGAAGGA ATCGCAGATC AACGAGGCCA TCGACCGGAT GCGCCACTCG
GCCACGCGGG CGCTGCTGGA ACGCGACGAC GTGATCATCG TCGCCTCGGT CTCCTGCATC
TACGGCATCG GCTCGGTCGA GACCTATTCG GCGATGACGC AGGACATGGT GGTCGGCCAG
CTCTACGACC AGCGCGAATT CCTGGCAGAA CTGGTGGCGC AGCAATATCG CCGCCTCGAC
GCCGCCTTCC AGCGCGGTGG CTTCCGCGTG CGAGGCGATC TGGTCGAGGT CTGGCCGGCC
CACTTGGAAG ACCGGGCCTG GCGCTTTGAC TTCTTCGGAA ACGAACTTGA ATCGATTACC
GAATTCGATC CGCTGACCGG CGCCAAGACC GACAGCTTCA AGCAGATCCG CATCTATGCC
AACAGCCACT ACGTCACTCC GCGGCCGACT TTGCAGCAGG CAATCAAGGG GATACGGACA
GAACTTCAGA CACGGCTGAA GCAACTTGCC GACGAGGGCA AGCTGCTGGA GGCGCAGCGG
CTTGAACAGC GCACGAACTT CGACCTGGAA ATGCTTGAAG CTACTGGAGT TTGCAACGGG
ATCGAGAACT ATTCCCGCTA TCTGACCGGC CGGGCGCCCG GCGAGCCGCC GCCGACGCTG
TTCGAGTTCA TCCCCGACAA TGCCATCGTC TTTGCCGACG AATCCCATGT CAGCGTGCCG
CAGATCGGCG GCATGTATCG CGGCGACTTC CGGCGCAAGT TCACGCTGGC CGAGCATGGC
TTCCGCCTGC CCAGCTGCAT GGACAACCGG CCGCTGAAAT TCGAGGAATG GGACGCGATG
CGCCCGCAAT CGGTCTTTGT CAGCGCCACG CCTGCGCAAT GGGAGCTGGA CCAGACCGGC
GGCGTCTTCA CCGAACAGGT CATCCGCCCC ACGGGCCTGC TGGACCCGCA GGTCGAGATC
CGCCCGGTCG AGATGCAGGT GGACGACCTC TTGGACGAGG TGCGCAAGGT CGCCGCCGCC
GGCATGCGCA CGCTGGTCAC CACCCTGACC AAGCGCATGG CCGAGGACCT GACCGAATAC
CTGCACGAAC AGGGCATCCG CGTGCGCTAC ATGCACAGCG ACATCGACAC CATCGAGCGC
ATCGAGATCC TGCGCGACCT GCGGCTGGGG GCCTTCGACG TTCTGGTGGG CATCAACCTG
CTGCGCGAGG GGCTGGACAT CCCCGAATGC GGGCTGGTGG CGATCCTCGA TGCCGACAAG
GAGGGCTTCC TGCGCTCGGA AACATCACTG ATCCAGACCA TCGGCCGGGC GGCGCGGAAC
GCCGACGGCC GCGTCATCAT GTATGCCGAC CGCATCACCG GCAGCATGGA GCGCGCCATG
GCCGAGACCG AGCGCCGGCG CCAGAAGCAG GTCGCCTATA ACGAAGCGCA CGGCATCACG
CCGCAGACCG TGCGCAAGAA TGTCGAGGAC GTGCTGGCCG GGCTGTGGCA AGGCGATACC
GATCAGGCGC GCATCACCAC CCGGGTCGAG AAACCGATGG TCGGCGCCAA CCTGGCGGCG
CATTTGGACG CGCTGCGGGC GCAGATGCGC AAGGCGGCCG AGAACCTGGA ATTCGAGGAA
GCCGCGCGGC TGCGCGACGA GGTGAAGCGA CTGGAGGCGG TCGAACTGGC GATCGCCGAC
GACCCGCTGG CCCGGCAATC CGCCATCGAG GAGGCGGCCG AGGCGGCGGT CAAGTCATCG
GGACGCTCGA CCGCGGGGCG GGCCGGACAG CGCGGCGGCA ACAAACGGTC GCGCCGCCGC
GGCTGA
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| Protein sequence | MRQIDPGRNK GETMGHNNTN APVARFPEVS RPKLEGGKRF VMRSEFQPAG DQPTAIAELS
QGVRAGERDQ VLLGATGTGK TFTMAKVIEQ TQRPAIILAP NKTLAAQLYG EFKGFFPENA
VEYFVSYYDY YQPEAYVARS DTYIEKESQI NEAIDRMRHS ATRALLERDD VIIVASVSCI
YGIGSVETYS AMTQDMVVGQ LYDQREFLAE LVAQQYRRLD AAFQRGGFRV RGDLVEVWPA
HLEDRAWRFD FFGNELESIT EFDPLTGAKT DSFKQIRIYA NSHYVTPRPT LQQAIKGIRT
ELQTRLKQLA DEGKLLEAQR LEQRTNFDLE MLEATGVCNG IENYSRYLTG RAPGEPPPTL
FEFIPDNAIV FADESHVSVP QIGGMYRGDF RRKFTLAEHG FRLPSCMDNR PLKFEEWDAM
RPQSVFVSAT PAQWELDQTG GVFTEQVIRP TGLLDPQVEI RPVEMQVDDL LDEVRKVAAA
GMRTLVTTLT KRMAEDLTEY LHEQGIRVRY MHSDIDTIER IEILRDLRLG AFDVLVGINL
LREGLDIPEC GLVAILDADK EGFLRSETSL IQTIGRAARN ADGRVIMYAD RITGSMERAM
AETERRRQKQ VAYNEAHGIT PQTVRKNVED VLAGLWQGDT DQARITTRVE KPMVGANLAA
HLDALRAQMR KAAENLEFEE AARLRDEVKR LEAVELAIAD DPLARQSAIE EAAEAAVKSS
GRSTAGRAGQ RGGNKRSRRR G
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