| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1289 |
|---|
| Symbol | |
|---|
| ID | 4580908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 1248863 |
|---|
| End bp | 1251742 |
|---|
| Gene Length | 2880 bp |
|---|
| Protein Length | 959 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639768607 |
|---|
| Product | putative monovalent cation/H+ antiporter subunit A |
|---|
| Protein accession | YP_915090 |
|---|
| Protein GI | 119384034 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
[COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit |
|---|
| TIGRFAM ID | [TIGR00943] monovalent cation:proton antiporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGAAC AGAACCTGTT GCTCTTGCTT GTTCTGACGC CATTCGTGTC GGCCGCCCTG
GCGGCCACGC TTCCCATAGG GGCGCGCAAC GCCGAAGCCT GGCTGGCCGG GCTGACGATG
ATCGTCGCGC TGGTGATCCT GGGCGTGCTC TATCCCGCCG TGACCGAGGG GCGAAGCATC
ACCGGCACCT TCCGATGGGT CAGTTCCATC GGGCTTGACC TGACCTTCCG CATCGACGGG
TTTTCCTGGC TGTTCATGGT GCTGGTGGCG GGGATAGGCT TCCTCGTCAT CCTTTACGCG
CGCTATTACA TGTCGCCCGA CGACCCGGTG CCGCGGCTTT ATTCCTGCCT GCTGGCCTTT
GCCGGCGCCA TGTCGGGGCT GCTGCTGTCG GGCAACATCA TCATGCTGGT GGTGTTCTGG
GAACTGACCA GCATCGTGTC CTTCCTGCTG ATCGGCTATT GGTTCCAGCG CCAGGATGCG
CGCGACGGGG CGCGGATGTC GCTGATCGTC ACCGCCTCGG GCGGGCTGTG CCTGATGGTG
GCGATGATCA TCCTGGGCCA GATCGCCGGC AGCTACGATC TCGACGCCGT GCTGGCCGCC
GGGCCGCAGA TCACCAGCCA TCGGCTTTAT CCGGCGGTGC TGATCCTGTT CGTGCTGGGC
GCCTTCACCA AATCGGCGCA GTTCCCGTTC CATTTCTGGC TGCCGAACGC CATGGCGGCG
CCGACCCCGG TTTCCTCCTA CCTGCATTCG GCGACCATGG TGAAGGCCGG GGTCTTCGTG
CTCTTGCGCT TTCACCCGGC GCTGGGGGGC ACGGATGCCT GGTTCCAGAT CGTCACCGGC
ATCGGCCTGA CCACGCTGCT CCTCGGGGCG GTGACGGCGC TGTTCCGCCA CGACCTCAAG
GGCCTTCTGG CCTATTCCAC CATCAGCCAT CTGGGGCTGA TCACCGCGCT GGCGGGGATC
GGCACGCCCT TTGCGCTGGT CGCGGCGGTG TTCCACATCG TTAACCACGC GGTCTTCAAG
GCCTCGCTGT TCATGGCCGC AGGGATCATC GACCACGAGA CGGGCACCCG CGACATGCGC
CGCCTGTCGG GCCTGGCCCG GGTGATGCCG GTCACGGCAG CGCTGGCGAT CATCGCCTCG
GGCGCCATGG CCGGGGTGCC GCTGCTCAAC GGGTTCCTGT CCAAGGAGAT GTTCTTCGAG
GCGACCTATG TCTGGAACAA CGGCGGCTCG CTCGACAGTT TCGCACCCTA TGTCGCGGTG
CTGGCCGGGG CGTTCAGCGC CGCCTATTCG CTGCGCTTCA TCGTGAAGGT GTTCTTCGGC
CCCCCCGCCA CCGACCTGCC GCAGGAGCCG CACGAACCGC CGCTGCTGAT GCGCCTGCCG
GTGGCGATCC TGGTCGCGAT CTGCCTTGCC GTCGGCATGT TCCCGCAGCA GGTGCTGGGC
ACCTGGCTGC AGACCGCCAG CCTGGCCGTG GTCGGCCCCG AACTGCCGCA TTTCAGCCTG
AAGATCTGGC ACGGCGTGAA CCCGCCGCTG ATCATGAGCC TGATCGCCAT GACGCTGGGC
GCGCTGATCT ATCTGCTGCC GCGCCGGCTG ATCGATTCGG GCGAGGACGG CACGCGGCTG
ATGCGCCGGC TGGACTTCGC GCGCGGCTTC GACTGGCTGT TGCAGAACCT GACCATCCGC
CTGCCGCGCT TCGCGCTGCG GGTGCTGTCG GCGAACGGCC TTCAGTCGCA GCTGCGCGCC
ATGGTGCTGC TGTCGCTGGC CGGGGCCTGG TTCGTGCTGC GGACGCTGGA CTGGAACGTG
CCCATGCCCG AATTGGGTGC CAGCGAGCTG GTCTTTGCCT TGCTCTGGGT CGTCGGCGGC
ACCTGCGCCA TCGGCGCCGC CTGGCAGGCC AAGTATCACC GCTTCGCCGC CCTGGTGCTG
ATGGGCGGCG CGGGGCTGGT GACCTGCGCG ACCTTCGTCT GGCTGTCGGC CCCCGACCTA
GCCGTGACCC AGTTGCTGGT CGAGATCGCG ACCACCGCAT TGCTGCTTCT GGGCCTGCGC
TGGCTGCCCA AGCGCAACGA AGAAATCGCC GGGGACAACA ACCTGGTCGC CCGGTCGCGC
CGCAGCCGCG ATCTGCTGAT CGCGCTGGCC TGCGGCTCGG GCATGACGGC GCTGGCGCTG
GCGGTGCTGC TGACCCCGCC CGGCGCCTCG GTCGGCGACT GGTTCCTGCG CAACGCCTAT
GTCGAAGGCG GCGGCACCAA TGTCGTCAAC GTCATCCTGG TCGATTTCCG CGCCTTCGAC
ACCTTCGGCG AGATCACCGT TCTGGCCATC GTCGGGCTGA CCGTCTATGC GCTCTTGCGC
CGCTTCCGCC CCGCGCCCGA AAGCGTCGAG CGCCCGCGCC CGCAGCTCGA TGCCGAGGAG
CAGGCGCTAG AAGCCTATCT CTTCGTGCCC TCGGTGCTGA TGCAATGGCT GTTCGCGCCG
ATCATCGCGC TGTCGGCCTA TCTGTTCTTC CGCGGCCATG ACCTGCCGGG CGGGGGCTTT
GCCGCCGGCG TCACGCTGGC CGTCGGCCTG CTGCTGCAAT ATGTCGCGGC CAATGTGCGC
TGGGTCGAGG CGCGGATCAT CGTGCTGCCG GTGCGCTGGA TGGCCTCGGG CCTGACCATC
TCGGCGGCGG TGGGGGCCGG GTCCTGGATC TTCGGCTATC CGTTCCTCAG CGCGCATGCA
CAGTATCTGG ACATCCCGAT CATCGGCAAG GTGCCCTTCT CGACCGCGAT GCTGTTCGAT
TTCGGCGTGT TCTCGCTGGT GATGGGTGCC ATCGTGCTGA TGTTGATCGC CATTGCCCAC
CAGTCGCTGC GCGTCGCCCC GCGCGCCCGC CCGGTCGAAC CCAGCGAGGA GACGAACTGA
|
|---|
| Protein sequence | MVEQNLLLLL VLTPFVSAAL AATLPIGARN AEAWLAGLTM IVALVILGVL YPAVTEGRSI
TGTFRWVSSI GLDLTFRIDG FSWLFMVLVA GIGFLVILYA RYYMSPDDPV PRLYSCLLAF
AGAMSGLLLS GNIIMLVVFW ELTSIVSFLL IGYWFQRQDA RDGARMSLIV TASGGLCLMV
AMIILGQIAG SYDLDAVLAA GPQITSHRLY PAVLILFVLG AFTKSAQFPF HFWLPNAMAA
PTPVSSYLHS ATMVKAGVFV LLRFHPALGG TDAWFQIVTG IGLTTLLLGA VTALFRHDLK
GLLAYSTISH LGLITALAGI GTPFALVAAV FHIVNHAVFK ASLFMAAGII DHETGTRDMR
RLSGLARVMP VTAALAIIAS GAMAGVPLLN GFLSKEMFFE ATYVWNNGGS LDSFAPYVAV
LAGAFSAAYS LRFIVKVFFG PPATDLPQEP HEPPLLMRLP VAILVAICLA VGMFPQQVLG
TWLQTASLAV VGPELPHFSL KIWHGVNPPL IMSLIAMTLG ALIYLLPRRL IDSGEDGTRL
MRRLDFARGF DWLLQNLTIR LPRFALRVLS ANGLQSQLRA MVLLSLAGAW FVLRTLDWNV
PMPELGASEL VFALLWVVGG TCAIGAAWQA KYHRFAALVL MGGAGLVTCA TFVWLSAPDL
AVTQLLVEIA TTALLLLGLR WLPKRNEEIA GDNNLVARSR RSRDLLIALA CGSGMTALAL
AVLLTPPGAS VGDWFLRNAY VEGGGTNVVN VILVDFRAFD TFGEITVLAI VGLTVYALLR
RFRPAPESVE RPRPQLDAEE QALEAYLFVP SVLMQWLFAP IIALSAYLFF RGHDLPGGGF
AAGVTLAVGL LLQYVAANVR WVEARIIVLP VRWMASGLTI SAAVGAGSWI FGYPFLSAHA
QYLDIPIIGK VPFSTAMLFD FGVFSLVMGA IVLMLIAIAH QSLRVAPRAR PVEPSEETN
|
|---|
| |