Gene Pden_1288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1288 
Symbol 
ID4580907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1248519 
End bp1248863 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content65% 
IMG OID639768606 
Productputative monovalent cation/H+ antiporter subunit C 
Protein accessionYP_915089 
Protein GI119384033 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1006] Multisubunit Na+/H+ antiporter, MnhC subunit 
TIGRFAM ID[TIGR00941] Multicomponent Na+:H+ antiporter, MnhC subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.97867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGA TCCTTGCCCT TGCCATCGGC ATCCTGGTCG GCTCAGGCGT CTGGCTGATG 
CTGCGCCCGC GTTCCTATCA GGTCATCATC GGCCTGTGCC TGCTGGCCTA TGGGGTGAAC
CTGTTCATCT TCGCCATGGG CCGGCTCTAT ATCGGCGGGG CGCCCATCAT GCCCAAGGGC
GGCTTCGTCG ATCCGTCCGC CTATGCCGAC CCGATGCCGC AGGCGCTGGT GCTGACCGCC
ATCGTCATCA GCTTCGCCAC CACGGCGCTG TTCCTTGTCC TGATGATCGC CGCGCGCGGT
GCCACCGGCA CCGACCATGT CGACGGCCGG GAGCGCCATT CATGA
 
Protein sequence
MELILALAIG ILVGSGVWLM LRPRSYQVII GLCLLAYGVN LFIFAMGRLY IGGAPIMPKG 
GFVDPSAYAD PMPQALVLTA IVISFATTAL FLVLMIAARG ATGTDHVDGR ERHS