Gene Pden_1286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1286 
Symbol 
ID4580905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1246304 
End bp1246792 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content65% 
IMG OID639768604 
Productcation antiporter 
Protein accessionYP_915087 
Protein GI119384031 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.964773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGGC TGGTGCCCCA TCCCGTGCTT TCGGCCGCGC TGGTGGTGAT GTGGCTGTTT 
CTGACCGCAT TCACGCTGGG CCACCTGCTG CTTGGCACGC TGATCGCGCT GTGGGCGGGC
TGGTCGGTCG AGCATCTGCA CCCGCCGAAG CCGGTCTTTC GGCGCTGGCT GGCGATCCCC
AAGCTGATGG CGATCGTGGC GGTGGACATC CTGCGCTCGA ACATCACCGT GGCGCGGGTG
CTGATCCTGG GCCCCGACCA TCCGAAATAC CATTCGGGCT TCGTCGAGCT GACGTTGCGC
ATGCGCGATC CCAACGCCAT CGCGGTGCTG GCGATCATCC TGACCGGCAC CCCCGGCACC
GCCTGGATCG AGTTCGACCA GGAGGAAGGC CGGCTTCTGC TGCATGTCCT CGACCTGCGC
AGCGACGACG ACTGGCAAAC CCTGATCCGC GACCGCTACG AGGCCCTGCT CATGGAGATA
TTCGAATGA
 
Protein sequence
MSRLVPHPVL SAALVVMWLF LTAFTLGHLL LGTLIALWAG WSVEHLHPPK PVFRRWLAIP 
KLMAIVAVDI LRSNITVARV LILGPDHPKY HSGFVELTLR MRDPNAIAVL AIILTGTPGT
AWIEFDQEEG RLLLHVLDLR SDDDWQTLIR DRYEALLMEI FE