Gene Pden_1273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1273 
Symbol 
ID4580312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1231984 
End bp1232874 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content70% 
IMG OID639768591 
Productlipid A biosynthesis acyltransferase 
Protein accessionYP_915074 
Protein GI119384018 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.254537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA CCGAAACCCA GGACGCCGCG CCGCTGCGCG ACCGCATCGC CAACGGCGCC 
TTCCTTGCCA TCATGGGCCT GGCCCGCATC CTGCCCTATG AGCGGCGCAT CCCCGCCATG
GGCTGGTTCT TCGCCCATGT GCTGGGCCCC CTCGCCGGCT GGCGCAGGCG CATCCGCGCC
AACCTGGCCA TGGCGCGCCC CGACCTTTCG GCCTCCGAGG TCCGCCGCCT GACCCGCGCG
GTGCCGGACA ATGCCGGCCG CTCGCTGGCC GAGATCTATT CCGGCACCGA GTTCACCGAC
CGCATCCACC GGACCGATCC CCTGACCGGC CCCGGCCTGC CGGCGCTGGA ACAGGCCGCG
CAGGCAGGCC GGCCGGTCAT TCTGGCCGTG GCGCATTTCG GCAACTACGA TGCCATGCGC
GCGGCGCTGA CCGGGCGCGG CTGGCCGGTA GGCGCGCTTT ACCGGCCGAT GAACAACGAG
GCCTTCAACC GCCATTACAT CCCCGCCATG CGCGCCATCG CCGAGCCGAT GTTCCCGCGC
GGCCGCGCCG GGCTGGCCGC CATGCTGCGC TTTCTCAAGG GCGGCGGCTG GCTTTCGCTG
GGCTTCGACC AGTTCGACGG CCACGGCACC GAGCTGCGCT TTTTCGGCCT GCCGTCGAAG
ACCGTGCTGA CCCCGGCGGA ACTGGCGCTG CGCTACGACG CGCTGATCCT GCCCATCGCC
GGGGTGCGCC AGCCCGACGG GCTGAGCTTT CGCGTCGAGG TCGGCGAACC CGTTCCGCAC
AGCGATCCGA TAACCATGAT GCAGGCGCTG AACGACGATC TGGAGCGGCT GGTCCGTGCG
CATATGGAGC AATGGTTCTG GGTGCATCGG CGCTGGAAAC GCAGGGGCTA G
 
Protein sequence
MSETETQDAA PLRDRIANGA FLAIMGLARI LPYERRIPAM GWFFAHVLGP LAGWRRRIRA 
NLAMARPDLS ASEVRRLTRA VPDNAGRSLA EIYSGTEFTD RIHRTDPLTG PGLPALEQAA
QAGRPVILAV AHFGNYDAMR AALTGRGWPV GALYRPMNNE AFNRHYIPAM RAIAEPMFPR
GRAGLAAMLR FLKGGGWLSL GFDQFDGHGT ELRFFGLPSK TVLTPAELAL RYDALILPIA
GVRQPDGLSF RVEVGEPVPH SDPITMMQAL NDDLERLVRA HMEQWFWVHR RWKRRG