Gene Pden_1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1272 
Symbol 
ID4580311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1231359 
End bp1231880 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content68% 
IMG OID639768590 
Productacetyl-CoA carboxylase, biotin carboxyl carrier protein 
Protein accessionYP_915073 
Protein GI119384017 
COG category[I] Lipid transport and metabolism 
COG ID[COG0511] Biotin carboxyl carrier protein 
TIGRFAM ID[TIGR00531] acetyl-CoA carboxylase, biotin carboxyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.12358 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG AATCCAAAAA CGCTGGTCAC GAAAAACGTC ATCACGAGGG CGATGTCGCC 
TTCATCCAGG CGCTGGCCGA ATTGCTCAAT CGCAACGAGC TGACCGAACT GACCGTCAAG
CGCGAATATG ACGAGAACGA CCGGCTGACC GTCAGCCTTT CCAAGCAGAA CAAGCAGATC
ATCCAGACCG TGGCCGCGCC CGCCGCCGCC CCGGCACCCG CCGCGCCCGC TGCCCCGGCG
GCGCCTGCCG CCCCGGTCCC GGCCGCCAGC GAGGATCCGG CCAGCCTGCC CGGCGTCGTG
GCCTCGCCCA TGGTCGGCAC CGCCTATCTG GCGCCGGAGC CCGGCGCCAC GCCCTTCGTC
ACCATCGGCC AGCAGGTCAA GGAGGGCGAG ACGCTGATGA TCGTCGAGGC GATGAAGACG
ATGAATCACA TCCCCTCGCC CCGCTCGGGC ACGGTCAAGC GCATCCTGGT CGACGACGGC
AGCCCGGTCG AGTTCGGCGC GCCCCTGATG GTCGTCGAGT GA
 
Protein sequence
MSDESKNAGH EKRHHEGDVA FIQALAELLN RNELTELTVK REYDENDRLT VSLSKQNKQI 
IQTVAAPAAA PAPAAPAAPA APAAPVPAAS EDPASLPGVV ASPMVGTAYL APEPGATPFV
TIGQQVKEGE TLMIVEAMKT MNHIPSPRSG TVKRILVDDG SPVEFGAPLM VVE