Gene Pden_1270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1270 
Symbolaat 
ID4580309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1229325 
End bp1229963 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content65% 
IMG OID639768588 
Productleucyl/phenylalanyl-tRNA--protein transferase 
Protein accessionYP_915071 
Protein GI119384015 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2360] Leu/Phe-tRNA-protein transferase 
TIGRFAM ID[TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGG GCCTGACCGC CGAACGGATG CTGGCCGCCT ATGCGCAGGG GGTGTTTCCG 
ATGGCGGAAT CCGCCTCGGC TGCCCAGCTT TACTGGTTCG AGCCGGCGTT GCGCGGCATC
CTGCCAGTAG GGGGCGTGCA TGTCTCGCGC TCGATGCGGC GTTTTCTGCG CCATTGCGAC
TGGCGCGCGA CGATCGACAA TGATTTTGCC GGGGTGGTGG CGGGCTGCGC CGATCGCGAG
GAAACCTGGA TCAACGCGCC GCTCCTTGCG CTTTATCAGG ATCTGTTCCG CATGGGTCAT
GCCCATTCGC TGGAGATCCG TGCCGGCGAG GACCTGATCG GCGGCATGTT CGGCCTGACG
CTGGGCGGGG CGTTCTTTGC CGAAAGCATG TTCTCGCGGC GCAGCAACGC CTCCAAGGCG
GCGCTGATCT GGATGTCGTC GCATCTGGCG CGCTGCGGCT TCACGCTTTG GGACACGCAG
TATCCGAACC CGCATCTGGC CTCGATGGGC GGTCGGGCCA TTCCACGACT TGAATATCGC
CGGAGGCTGG CGGCCGCGTT ACGGATTCCC GCCGACTTCA CCGCCCATGC CCTGCCCGAC
GTTCAGGCCC TGTTGCAGGA AATCACCCAG ACATCGTAG
 
Protein sequence
MSGGLTAERM LAAYAQGVFP MAESASAAQL YWFEPALRGI LPVGGVHVSR SMRRFLRHCD 
WRATIDNDFA GVVAGCADRE ETWINAPLLA LYQDLFRMGH AHSLEIRAGE DLIGGMFGLT
LGGAFFAESM FSRRSNASKA ALIWMSSHLA RCGFTLWDTQ YPNPHLASMG GRAIPRLEYR
RRLAAALRIP ADFTAHALPD VQALLQEITQ TS