Gene Pden_1268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1268 
Symbol 
ID4580307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1228406 
End bp1228873 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content68% 
IMG OID639768586 
Producthypothetical protein 
Protein accessionYP_915069 
Protein GI119384013 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCCG CCGCCGAACG GGCCGAGCTT TGGGTTGGCG CGGCGGTTCT GGCCGTGGCG 
GCCGGGTTTC TCGTCTGGTC CACCACCGGC AGCAGGCTGG GCGTGTCCCT GGCGGGCGGC
TATGAGTTGC GCGCGGCCTT TCCCAATGTC GACGGCATCG AGGTCGGCAC CGATGTCCGG
GTCGCCGGCG TCAGGGTGGG GCGCGTGTCG GCCGTCGATC TGAACCCGCA GACCTACCAT
GCCGAGGCGC GGCTGCGCCT GCCCGACAGC ATCCGCCTGC CCAGCGACAG CGCGGCGCTG
ATCCAGTCGG ACGGGCTTCT GGGCGGGGCC TATATCGAAT TGCAGCCCGG CGGCGCCCCC
GACAACCTGG CGCCCGGCGA CGAGATCGAG GATGTGCAGG GTGCAGTCAG CCTGATTTCG
CTGATGATGA AATTCGTGGA TGCGCAAAGC ACGGATGACA GCCCATGA
 
Protein sequence
MNSAAERAEL WVGAAVLAVA AGFLVWSTTG SRLGVSLAGG YELRAAFPNV DGIEVGTDVR 
VAGVRVGRVS AVDLNPQTYH AEARLRLPDS IRLPSDSAAL IQSDGLLGGA YIELQPGGAP
DNLAPGDEIE DVQGAVSLIS LMMKFVDAQS TDDSP