| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1266 |
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| Symbol | clpX |
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| ID | 4580305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1226538 |
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| End bp | 1227803 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639768584 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_915067 |
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| Protein GI | 119384011 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCAATC CGACCGGCGG CGACAGCAAG AACACGCTCT ATTGCAGCTT CTGCGGCAAG
AGCCAGCATG AGGTCCGCAA GCTGATTGCC GGTCCGACCG TATTCATCTG CGATGAATGC
GTCGAGCTTT GCATGGACAT CATCCGCGAG GAGACCAAGT CCTCGGCGCT GAAATCCGGC
GACGGCGTGC CCACCCCGCG CGAGATCTGC AACGTGCTGG ACGATTACGT GATCGGCCAG
GAACATGCCA AGCGCGTGCT TTCGGTGGCG GTCCACAACC ATTACAAGCG GCTGAACCAC
AGCTCCAAGA CCGATATCGA GCTGGCCAAG TCGAACATCC TGCTGATCGG TCCGACCGGC
TGCGGCAAGA CGCTGCTCGC GCAGACCCTG GCGCGCATCC TGGACGTGCC CTTCACCATG
GCCGACGCGA CCACGCTGAC CGAGGCCGGC TATGTCGGCG AGGATGTCGA GAACATCATC
CTGAAGCTGT TGCAGGCCAG CGAATACAAC GTCGAGCGGG CGCAGCGCGG CATCGTCTAT
ATCGACGAGG TCGACAAGAT CACCCGCAAG TCCGACAATC CCTCGATCAC CCGCGACGTC
TCGGGCGAGG GGGTGCAGCA GGCGCTTCTG AAGATCATGG AGGGCACGGT CGCCTCGGTG
CCGCCGCAGG GCGGGCGCAA GCATCCGCAG CAGGAGTTCC TGCAGGTCGA CACGACCAAC
ATCCTGTTCA TCTGCGGCGG TGCCTTTGCC GGTCTGGACC GGATCATCGC GCAGCGCAAC
AAGGGCACGG CCATGGGCTT CGGCGCCGCG GTCAAGGAAG ACGACGACAA GGGCGTGGGC
GAGCTGTTCA AGCAGCTTGA GCCCGAGGAT CTGCTGAAAT TCGGCCTGAT CCCCGAATTC
GTCGGCCGCC TGCCGGTGAT CGCCACGCTG GGCGATCTGG ACGAGCAGGC GCTGATCACC
ATCCTGACCC AGCCCAAGAA TGCGCTGGTC AAGCAGTATC AGCGGCTCTT CGATCTGGAG
AGCGTGAAGC TGACCTTCAC CGAGGATGCG CTGACCGCCA TCGCCAAGCG CGCCATCAAG
CGCAAGACCG GCGCCCGCGG GCTGCGCTCG ATCATGGAGG ACATCCTGCT CGACACCATG
TTCGACCTGC CCGGCATGGA CAGCGTCGAG GAGGTGGTGG TCAACGAGGA GGCGGTGGAC
AATCCCACGG CCAAGCCGCT GCTGATCCAC ACCGATTCGA AGAAGGAAAC CGCCAGCGCC
GGCTAA
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| Protein sequence | MANPTGGDSK NTLYCSFCGK SQHEVRKLIA GPTVFICDEC VELCMDIIRE ETKSSALKSG
DGVPTPREIC NVLDDYVIGQ EHAKRVLSVA VHNHYKRLNH SSKTDIELAK SNILLIGPTG
CGKTLLAQTL ARILDVPFTM ADATTLTEAG YVGEDVENII LKLLQASEYN VERAQRGIVY
IDEVDKITRK SDNPSITRDV SGEGVQQALL KIMEGTVASV PPQGGRKHPQ QEFLQVDTTN
ILFICGGAFA GLDRIIAQRN KGTAMGFGAA VKEDDDKGVG ELFKQLEPED LLKFGLIPEF
VGRLPVIATL GDLDEQALIT ILTQPKNALV KQYQRLFDLE SVKLTFTEDA LTAIAKRAIK
RKTGARGLRS IMEDILLDTM FDLPGMDSVE EVVVNEEAVD NPTAKPLLIH TDSKKETASA
G
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