Gene Pden_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1260 
Symbol 
ID4580026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1222629 
End bp1223051 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content69% 
IMG OID639768578 
Productferric uptake regulator family protein 
Protein accessionYP_915061 
Protein GI119384005 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATCG AAAACCGCGC CCAAGCCTTC GAGGACGCGC TGCGCCGTGC CGGCGTGCGC 
ATCACCCGCC AGCGCGCCGC GCTGCTGCGC GTGCTGGCAG CGGCCGAGGA TCATCCCGAC
GCGACGCAAC TGCATCAGCG CGCCATGGCG GCGGGGGCGG GGGTGTCGCT GGCGACGGTT
TATCGCACGC TCTCGGCGCT CGAGACGCAG GGCATGATCC AGAAGCTGGA ATTCGAGGGC
GAACCCGCCC GGTTCGAGCC CGCCGACGGC CACCACCACG ACCACATGAT CGATGTCGAG
ACCGGCGAGG TCATGGAATT CGTCAACGAG CGCATCGAGC GGCTGCAGGC CGAGATCGCC
GCCGAGATGG GCTATGAGAT CGTCCGCCAC CGGCTGGAGC TTTACGTCCG GCGCCGTCGA
TGA
 
Protein sequence
MEIENRAQAF EDALRRAGVR ITRQRAALLR VLAAAEDHPD ATQLHQRAMA AGAGVSLATV 
YRTLSALETQ GMIQKLEFEG EPARFEPADG HHHDHMIDVE TGEVMEFVNE RIERLQAEIA
AEMGYEIVRH RLELYVRRRR