Gene Pden_1259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1259 
Symbol 
ID4580025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1221618 
End bp1222523 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content69% 
IMG OID639768577 
Productperiplasmic solute binding protein 
Protein accessionYP_915060 
Protein GI119384004 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCA GAACATTCCT GACCGCCGCC CTTGCCGGGC TTGCCGCCCC CGCCATCGTC 
CCCGGGCCTG CCCGGGCGCA GGCGGGCAAG CTCAAGGTGG CGACCACCTT CACCATCATC
GCCGACATGG CGCGCAACGT GGCGGGCGAC CGGGCCGAGG TGGTCTCGAT CACCAAGCCC
GGGGCCGAGA TCCACAATTA CGAGCCGACG CCCAGCGACC TGATCGGCGC GCGCGACGCT
GGCCTGATCC TGCGCAACGG GCTGAACCTG GAACTGTGGT TCGAGCAGTT CCTGCGCAAC
CTGGGCGACC TGCCCTCGGC CACGCTGACC GATGGGATCG AGCCGATGCC GATCTCGGGC
GGGCATTACG ACGGCAAGCC CAACCCCCAT GCCTGGATGG CGCTGGATAC GGCGCTGGTC
TATGTGGACA ATATCGCCGC CGCCCTGTCC AAGGCCGATC CCCAGGGCAC CGGCAGCTAT
CGCGCCAATG CCGGCCGCTA CAAGGGCGAG ATCGCGCGGA CCATCGGCCC GCTGCGCGAC
GCCGCCCGCG CCCTGCCCGA AGAACGGCGC TGGCTGGTGA CCTCGGAAGG GGCGTTTTCC
TATCTGGCGC GGGATTTCGG CCTGCGCGAA CTGTTCCTGT GGCCGATCAA CGCCGATGCG
CAGGGCACCC CCCAGCAGGT GCGGCGCGTG GTCGATGCCA TCAGGCAGCA CGACATTCCG
GTGGTGTTTT CGGAAAGCAC CGTCTCGGAC CGGCCGGCCA GGCAGATCGC GGCCGAGACC
GGGGCGCGCT ATGGCGGCGT GCTTTACGTC GACAGCCTGT CCGAGCCGGA CGGGCCGGTG
CCGACCTATC TGGACCTGCT GCGCGTGACT TCGGAAACCA TCGTCAGGGG GCTTTCCGAT
GCCTGA
 
Protein sequence
MKRRTFLTAA LAGLAAPAIV PGPARAQAGK LKVATTFTII ADMARNVAGD RAEVVSITKP 
GAEIHNYEPT PSDLIGARDA GLILRNGLNL ELWFEQFLRN LGDLPSATLT DGIEPMPISG
GHYDGKPNPH AWMALDTALV YVDNIAAALS KADPQGTGSY RANAGRYKGE IARTIGPLRD
AARALPEERR WLVTSEGAFS YLARDFGLRE LFLWPINADA QGTPQQVRRV VDAIRQHDIP
VVFSESTVSD RPARQIAAET GARYGGVLYV DSLSEPDGPV PTYLDLLRVT SETIVRGLSD
A