Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1259 |
Symbol | |
ID | 4580025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 1221618 |
End bp | 1222523 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639768577 |
Product | periplasmic solute binding protein |
Protein accession | YP_915060 |
Protein GI | 119384004 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGCA GAACATTCCT GACCGCCGCC CTTGCCGGGC TTGCCGCCCC CGCCATCGTC CCCGGGCCTG CCCGGGCGCA GGCGGGCAAG CTCAAGGTGG CGACCACCTT CACCATCATC GCCGACATGG CGCGCAACGT GGCGGGCGAC CGGGCCGAGG TGGTCTCGAT CACCAAGCCC GGGGCCGAGA TCCACAATTA CGAGCCGACG CCCAGCGACC TGATCGGCGC GCGCGACGCT GGCCTGATCC TGCGCAACGG GCTGAACCTG GAACTGTGGT TCGAGCAGTT CCTGCGCAAC CTGGGCGACC TGCCCTCGGC CACGCTGACC GATGGGATCG AGCCGATGCC GATCTCGGGC GGGCATTACG ACGGCAAGCC CAACCCCCAT GCCTGGATGG CGCTGGATAC GGCGCTGGTC TATGTGGACA ATATCGCCGC CGCCCTGTCC AAGGCCGATC CCCAGGGCAC CGGCAGCTAT CGCGCCAATG CCGGCCGCTA CAAGGGCGAG ATCGCGCGGA CCATCGGCCC GCTGCGCGAC GCCGCCCGCG CCCTGCCCGA AGAACGGCGC TGGCTGGTGA CCTCGGAAGG GGCGTTTTCC TATCTGGCGC GGGATTTCGG CCTGCGCGAA CTGTTCCTGT GGCCGATCAA CGCCGATGCG CAGGGCACCC CCCAGCAGGT GCGGCGCGTG GTCGATGCCA TCAGGCAGCA CGACATTCCG GTGGTGTTTT CGGAAAGCAC CGTCTCGGAC CGGCCGGCCA GGCAGATCGC GGCCGAGACC GGGGCGCGCT ATGGCGGCGT GCTTTACGTC GACAGCCTGT CCGAGCCGGA CGGGCCGGTG CCGACCTATC TGGACCTGCT GCGCGTGACT TCGGAAACCA TCGTCAGGGG GCTTTCCGAT GCCTGA
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Protein sequence | MKRRTFLTAA LAGLAAPAIV PGPARAQAGK LKVATTFTII ADMARNVAGD RAEVVSITKP GAEIHNYEPT PSDLIGARDA GLILRNGLNL ELWFEQFLRN LGDLPSATLT DGIEPMPISG GHYDGKPNPH AWMALDTALV YVDNIAAALS KADPQGTGSY RANAGRYKGE IARTIGPLRD AARALPEERR WLVTSEGAFS YLARDFGLRE LFLWPINADA QGTPQQVRRV VDAIRQHDIP VVFSESTVSD RPARQIAAET GARYGGVLYV DSLSEPDGPV PTYLDLLRVT SETIVRGLSD A
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