Gene Pden_1258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1258 
Symbol 
ID4580024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1220756 
End bp1221625 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content68% 
IMG OID639768576 
ProductABC transporter related 
Protein accessionYP_915059 
Protein GI119384003 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.822153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGACG CCCCCGGCAT CGAGGTCTCC GGCCTGACGG TGGCCTATCG CAACGGCTTC 
ACGGCGCTGC GGGATGCAAG CTTCACCGTG CCGCAAGCCT CGGTCACGGC GCTGGTGGGG
GTGAACGGTT CGGGGAAATC CACGCTGTTC AAGGCGCTGA TGGGTTTCGT TCCGGCCGCC
GCCGGCAAGG TGCGGGTGCT GGGCATGACC GTGCCGCAGG CGCTGCGCCG CAACCTGATC
GCCTATGTCC CGCAGGCCGA GGAGGTGGAC TGGACCTTTC CGGTGCTGGT CGAGGACGTG
GTGATGATGG GCCGCTATGG CCATATGGGC TTTCTGCGCC GCGCGCGGCC CGAGGACCGC
CGCGCCGTGG ACGAGGCGCT GGCCCGCGTG AACATGCAGG ACTTCCGCCA CCGCCAGATC
GGCGAGCTTT CGGGCGGCCA GAAAAAGCGC GTCTTCCTGG CGCGGGCGCT GGCGCAAGGC
GCCTCGGTGA TCCTGCTCGA CGAGCCCTTT ACCGGCGTGG ACGTCAAGAC CGAATCCGCG
ATCATCAAGC TGTTGCAGCA GATGCGGGAC GAGGGCCGGG TCATGCTGGT CTCGACCCAT
GACCTCGGTT CGGTGCCGGA ATATTGCGAC CGGGTGGTGC TGGTGAAGAA CACCGTGCTG
GCCCATGGCC CGACGGCCGA GGTCTTTACG CCCGAGAACC TGCGCCTGGC CTTTGGCGGC
GTGCTGCGCC ATTTCGTGCT GGGCGCGCGG CATCTGCATG CGGACGACGA TCCGCGCGCG
CTGACCGTGC TGTCGGACGA CGAGCGCCCG CTGGTCTTTT ACGACGACAA GCAGCGCAGC
GCCCGCGAAG AAGAGGCGGC GCCGAAATGA
 
Protein sequence
MPDAPGIEVS GLTVAYRNGF TALRDASFTV PQASVTALVG VNGSGKSTLF KALMGFVPAA 
AGKVRVLGMT VPQALRRNLI AYVPQAEEVD WTFPVLVEDV VMMGRYGHMG FLRRARPEDR
RAVDEALARV NMQDFRHRQI GELSGGQKKR VFLARALAQG ASVILLDEPF TGVDVKTESA
IIKLLQQMRD EGRVMLVSTH DLGSVPEYCD RVVLVKNTVL AHGPTAEVFT PENLRLAFGG
VLRHFVLGAR HLHADDDPRA LTVLSDDERP LVFYDDKQRS AREEEAAPK