| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1257 |
|---|
| Symbol | |
|---|
| ID | 4580023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 1219899 |
|---|
| End bp | 1220759 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639768575 |
|---|
| Product | ABC-3 protein |
|---|
| Protein accession | YP_915058 |
|---|
| Protein GI | 119384002 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.227548 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCA CGCTGCTTGT CCCCTTTGAA TACAGCTACA TGACCGACGC GATCTGGGTC
TCGGCGCTGG TCGGCGGGGT CTGCGCCTTC CTGTCGGCCT ATCTGATGCT CAAGGGCTGG
TCGCTGATCG GCGACGCGCT GAGCCATTCC ATCGTGCCGG GCGTCGCCGG CGCCTATATG
CTGGGCCTGC CCTTCGCGCT GGGGGCGTTC CTGTCGGGCG GGCTGGCCGC GCTGACCATG
CTGTTCCTGA ACAAGCGCAC GGGCCTGCGC GAGGACGCGA TCATCGGCCT GATCTTCACC
GGCTTCTTCG GGCTGGGGCT GTTCATGGTC TCGCTCAACC CGATGGCGGT CAGCGTGCAG
ACCATCACCA TGGGCAACAT CCTGGCGATC ACGCCGGGCG ACACGCTGCA ACTGGCGCTG
ATCGGCGGCA TCTCGCTGCT GATCCTGGCG GCGAAATGGC GCGACCTGAT GGTGGTGTTC
TTCGACGAAA GCCATGCCCG CACCATCGGA CTGAACCCGC AGGCGCTGAA GGTGCTGTTC
TTCACCCTGC TTTCGGCCTG CACGGTCGCG GCGATGCAGA CCGTCGGCGC CTTCCTGGTC
GTTGCGCTGG TGGTGACGCC GGGCGCCACC GCCTATCTGC TGACCGACCG CTTTCCGCGG
CTGATCCTGA TCTCGGTGGC GATCGGCTCG CTCACCTCGG CGCTTGGCGC CTATGTCTCG
TTCTTCCTCG ACGGTGCGAC CGGGGGGGTG ATCGTCTGCC TGCAGACCGC GATCTTCCTG
GCCGTCTTCC TGCTGGCACC GAAGCACGGG CTTTTCGCCG CCCGCCGCCG CGCCCGCGCC
GCATTGAAGG AGGCCGCGTG A
|
|---|
| Protein sequence | MIRTLLVPFE YSYMTDAIWV SALVGGVCAF LSAYLMLKGW SLIGDALSHS IVPGVAGAYM
LGLPFALGAF LSGGLAALTM LFLNKRTGLR EDAIIGLIFT GFFGLGLFMV SLNPMAVSVQ
TITMGNILAI TPGDTLQLAL IGGISLLILA AKWRDLMVVF FDESHARTIG LNPQALKVLF
FTLLSACTVA AMQTVGAFLV VALVVTPGAT AYLLTDRFPR LILISVAIGS LTSALGAYVS
FFLDGATGGV IVCLQTAIFL AVFLLAPKHG LFAARRRARA ALKEAA
|
|---|
| |