Gene Pden_1256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1256 
Symbol 
ID4580022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1219069 
End bp1219899 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content69% 
IMG OID639768574 
ProductABC-3 protein 
Protein accessionYP_915057 
Protein GI119384001 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.829859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTGGC TGACGATGCC GCTTGCCTTT CCCTTCATGC GCGATGCGGC GCTGATCGGG 
CTGATGATCG CCCTGCCCGC CGGGCTTCTG TCCTGCTTCC TGGTGCTCAA GGGCTGGTCG
CTGATGGGCG ACGCGGTCAG CCATGCCGTG CTGCCCGGCG TGGTGCTGGC CTATGTCGCG
GGCCTGCCGC TGATCCTGGG CGCCTTTCTT GCCGGCATAA GCTGCGCGGC CCTGACCGGC
TGGTTGCAGG ACAACAGCCG CGTCAAGGCC GATACCGTGC TGGGCGTGGT CATGTCGGGC
ATGTTCGGGC TGGGAGTGGT GCTTTACACC GCCATCCAGA CCGACCTGCA CCTGGACCAT
ATCCTGTTCG GCAACATGCT GGGCGTCGGG CCGGAGGACT TGCGCCTCGC GGGCAGCATC
TCGGCGCTGG TCGGGCTGGC GCTGATCCTG AAATGGCGCG ACTTCGCGCT CCTGGCCTTC
GACCCGGTAC AGGCGCGGGT CTCGGGGCTG GCGCTGGCCG TGCTGAACTA CGGGCTGCTG
GCCATGATCT CGGCCACGGT CGTCGCCATG CTCAGTTCCG TCGGCATCAT CCTGGCGGTT
GCGCTGCTGA TCGCGCCGGG GGCGGTGGCC TTTCTGGTCA CGCGGCGGCT GCCAGTGATG
CTGGCCACAT CGGTCGCAGT CGCGGCATTC GCCGCGGTCA GCGGGGTCTG GGCCAGCTTC
TGGCTGAACA GCGCGCCCGC GCCGACCATC GTGCTGGTGC TGACGGCGCT GTTCGTGCTG
GCCTTCCTGT GGCGCAACAT CGCCACGCGG CGGGCGCAGG GGGCGGACTA G
 
Protein sequence
MDWLTMPLAF PFMRDAALIG LMIALPAGLL SCFLVLKGWS LMGDAVSHAV LPGVVLAYVA 
GLPLILGAFL AGISCAALTG WLQDNSRVKA DTVLGVVMSG MFGLGVVLYT AIQTDLHLDH
ILFGNMLGVG PEDLRLAGSI SALVGLALIL KWRDFALLAF DPVQARVSGL ALAVLNYGLL
AMISATVVAM LSSVGIILAV ALLIAPGAVA FLVTRRLPVM LATSVAVAAF AAVSGVWASF
WLNSAPAPTI VLVLTALFVL AFLWRNIATR RAQGAD